Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.75■□□□□ 0.59
KRT9P35527 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.75■□□□□ 0.59
KRT9P35527 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
KRT9P35527 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KRT9P35527 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
KRT9P35527 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
KRT9P35527 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
KRT9P35527 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.75■□□□□ 0.59
KRT9P35527 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
KRT9P35527 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
KRT9P35527 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.75■□□□□ 0.59
KRT9P35527 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.75■□□□□ 0.59
KRT9P35527 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KRT9P35527 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.74■□□□□ 0.59
KRT9P35527 KRT8P10-201ENST00000450021 1447 ntBASIC18.74■□□□□ 0.59
KRT9P35527 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT9P35527 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT9P35527 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.74■□□□□ 0.59
KRT9P35527 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT9P35527 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
KRT9P35527 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT9P35527 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
KRT9P35527 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT9P35527 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
KRT9P35527 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KRT9P35527 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.74■□□□□ 0.59
KRT9P35527 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT9P35527 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.74■□□□□ 0.59
KRT9P35527 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KRT9P35527 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KRT9P35527 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.74■□□□□ 0.59
KRT9P35527 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
KRT9P35527 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT9P35527 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.74■□□□□ 0.59
KRT9P35527 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT9P35527 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT9P35527 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.74■□□□□ 0.59
KRT9P35527 LINC00265-3P-201ENST00000447588 903 ntBASIC18.74■□□□□ 0.59
KRT9P35527 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.74■□□□□ 0.59
KRT9P35527 TOB2P1-201ENST00000469761 992 ntBASIC18.74■□□□□ 0.59
KRT9P35527 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.74■□□□□ 0.59
KRT9P35527 AC111152.3-201ENST00000569699 673 ntBASIC18.74■□□□□ 0.59
KRT9P35527 AP005901.3-202ENST00000581653 237 ntBASIC18.74■□□□□ 0.59
KRT9P35527 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.74■□□□□ 0.59
KRT9P35527 AC008741.2-201ENST00000612792 3115 ntBASIC18.74■□□□□ 0.59
KRT9P35527 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
KRT9P35527 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT9P35527 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT9P35527 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
KRT9P35527 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KRT9P35527 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT9P35527 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT9P35527 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.74■□□□□ 0.59
KRT9P35527 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.74■□□□□ 0.59
KRT9P35527 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
KRT9P35527 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KRT9P35527 AC006449.5-201ENST00000610658 2098 ntBASIC18.73■□□□□ 0.59
KRT9P35527 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.73■□□□□ 0.59
KRT9P35527 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
KRT9P35527 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
KRT9P35527 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.73■□□□□ 0.59
KRT9P35527 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.73■□□□□ 0.59
KRT9P35527 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.73■□□□□ 0.59
KRT9P35527 AC046158.3-201ENST00000624947 2558 ntBASIC18.73■□□□□ 0.59
KRT9P35527 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRT9P35527 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
KRT9P35527 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
KRT9P35527 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRT9P35527 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRT9P35527 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRT9P35527 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRT9P35527 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
KRT9P35527 FAM220CP-201ENST00000395253 831 ntBASIC18.73■□□□□ 0.59
KRT9P35527 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
KRT9P35527 AC103564.2-201ENST00000432853 1299 ntBASIC18.73■□□□□ 0.59
KRT9P35527 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.73■□□□□ 0.59
KRT9P35527 MINOS1P3-201ENST00000457048 203 ntBASIC18.73■□□□□ 0.59
KRT9P35527 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.73■□□□□ 0.59
KRT9P35527 STK25P1-201ENST00000585406 838 ntBASIC18.73■□□□□ 0.59
KRT9P35527 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
KRT9P35527 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.73■□□□□ 0.59
KRT9P35527 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRT9P35527 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
KRT9P35527 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
KRT9P35527 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
KRT9P35527 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRT9P35527 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
KRT9P35527 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.73■□□□□ 0.59
KRT9P35527 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRT9P35527 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.73■□□□□ 0.59
KRT9P35527 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
KRT9P35527 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.73■□□□□ 0.59
KRT9P35527 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
KRT9P35527 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRT9P35527 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRT9P35527 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
KRT9P35527 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.72■□□□□ 0.59
KRT9P35527 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT9P35527 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT9P35527 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms