Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.71□□□□□ -0.05
CCL1P22362 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCL1P22362 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CCL1P22362 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CCL1P22362 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCL1P22362 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCL1P22362 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCL1P22362 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC14.71□□□□□ -0.05
CCL1P22362 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC14.71□□□□□ -0.05
CCL1P22362 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCL1P22362 AC106795.1-205ENST00000512851 1056 ntBASIC14.71□□□□□ -0.05
CCL1P22362 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.71□□□□□ -0.05
CCL1P22362 RMI2-205ENST00000576027 818 ntTSL 2 BASIC14.71□□□□□ -0.05
CCL1P22362 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.71□□□□□ -0.05
CCL1P22362 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCL1P22362 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.71□□□□□ -0.05
CCL1P22362 AP001269.4-201ENST00000609611 512 ntBASIC14.71□□□□□ -0.05
CCL1P22362 AC091076.1-201ENST00000610741 619 ntBASIC14.71□□□□□ -0.05
CCL1P22362 AC092119.3-201ENST00000612618 583 ntBASIC14.71□□□□□ -0.05
CCL1P22362 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC14.71□□□□□ -0.05
CCL1P22362 AL139011.1-202ENST00000642063 584 ntBASIC14.71□□□□□ -0.05
CCL1P22362 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCL1P22362 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
CCL1P22362 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.71□□□□□ -0.05
CCL1P22362 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCL1P22362 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCL1P22362 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.71□□□□□ -0.05
CCL1P22362 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CCL1P22362 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCL1P22362 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
CCL1P22362 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CCL1P22362 AC243591.1-201ENST00000452967 1364 ntBASIC14.71□□□□□ -0.06
CCL1P22362 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CCL1P22362 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CCL1P22362 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCL1P22362 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCL1P22362 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCL1P22362 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CCL1P22362 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCL1P22362 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CCL1P22362 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCL1P22362 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCL1P22362 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCL1P22362 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCL1P22362 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCL1P22362 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCL1P22362 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CCL1P22362 AC006538.1-201ENST00000567905 1585 ntBASIC14.7□□□□□ -0.06
CCL1P22362 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCL1P22362 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.7□□□□□ -0.06
CCL1P22362 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCL1P22362 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCL1P22362 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CCL1P22362 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CCL1P22362 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
CCL1P22362 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC14.7□□□□□ -0.06
CCL1P22362 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.7□□□□□ -0.06
CCL1P22362 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
CCL1P22362 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.7□□□□□ -0.06
CCL1P22362 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCL1P22362 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCL1P22362 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCL1P22362 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCL1P22362 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.7□□□□□ -0.06
CCL1P22362 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCL1P22362 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.7□□□□□ -0.06
CCL1P22362 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.7□□□□□ -0.06
CCL1P22362 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCL1P22362 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.7□□□□□ -0.06
CCL1P22362 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCL1P22362 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCL1P22362 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCL1P22362 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCL1P22362 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.69□□□□□ -0.06
CCL1P22362 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
CCL1P22362 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCL1P22362 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.69□□□□□ -0.06
CCL1P22362 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.69□□□□□ -0.06
CCL1P22362 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CCL1P22362 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CCL1P22362 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.69□□□□□ -0.06
CCL1P22362 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCL1P22362 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.69□□□□□ -0.06
CCL1P22362 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCL1P22362 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCL1P22362 NCF1C-201ENST00000438382 1427 ntBASIC14.69□□□□□ -0.06
CCL1P22362 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCL1P22362 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.69□□□□□ -0.06
CCL1P22362 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCL1P22362 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.69□□□□□ -0.06
CCL1P22362 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CCL1P22362 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
CCL1P22362 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CCL1P22362 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCL1P22362 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCL1P22362 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCL1P22362 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.69□□□□□ -0.06
CCL1P22362 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.69□□□□□ -0.06
CCL1P22362 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCL1P22362 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms