Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ATP2B1P20020 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.75■□□□□ 0.75
ATP2B1P20020 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.75■□□□□ 0.75
ATP2B1P20020 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ATP2B1P20020 LINC01711-201ENST00000598340 967 ntBASIC19.75■□□□□ 0.75
ATP2B1P20020 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.75■□□□□ 0.75
ATP2B1P20020 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
ATP2B1P20020 LINC02012-201ENST00000608206 1725 ntBASIC19.75■□□□□ 0.75
ATP2B1P20020 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATP2B1P20020 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ATP2B1P20020 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATP2B1P20020 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.75■□□□□ 0.75
ATP2B1P20020 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
ATP2B1P20020 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP2B1P20020 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.74■□□□□ 0.75
ATP2B1P20020 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP2B1P20020 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.74■□□□□ 0.75
ATP2B1P20020 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP2B1P20020 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP2B1P20020 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP2B1P20020 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP2B1P20020 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
ATP2B1P20020 AL450487.1-201ENST00000426799 995 ntBASIC19.74■□□□□ 0.75
ATP2B1P20020 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.74■□□□□ 0.75
ATP2B1P20020 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
ATP2B1P20020 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP2B1P20020 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
ATP2B1P20020 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP2B1P20020 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.74■□□□□ 0.75
ATP2B1P20020 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ATP2B1P20020 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.74■□□□□ 0.75
ATP2B1P20020 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.74■□□□□ 0.75
ATP2B1P20020 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
ATP2B1P20020 AC008608.2-201ENST00000606089 416 ntBASIC19.74■□□□□ 0.75
ATP2B1P20020 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
ATP2B1P20020 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ATP2B1P20020 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP2B1P20020 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ATP2B1P20020 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP2B1P20020 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
ATP2B1P20020 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP2B1P20020 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ATP2B1P20020 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP2B1P20020 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.74■□□□□ 0.75
ATP2B1P20020 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC19.74■□□□□ 0.75
ATP2B1P20020 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP2B1P20020 AC092068.3-201ENST00000587894 2016 ntBASIC19.73■□□□□ 0.75
ATP2B1P20020 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
ATP2B1P20020 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.73■□□□□ 0.75
ATP2B1P20020 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ATP2B1P20020 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
ATP2B1P20020 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ATP2B1P20020 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
ATP2B1P20020 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.73■□□□□ 0.75
ATP2B1P20020 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
ATP2B1P20020 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.73■□□□□ 0.75
ATP2B1P20020 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP2B1P20020 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ATP2B1P20020 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP2B1P20020 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP2B1P20020 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.73■□□□□ 0.75
ATP2B1P20020 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ATP2B1P20020 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ATP2B1P20020 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP2B1P20020 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ATP2B1P20020 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP2B1P20020 AL356309.3-201ENST00000624132 1934 ntBASIC19.72■□□□□ 0.75
ATP2B1P20020 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.72■□□□□ 0.75
ATP2B1P20020 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ATP2B1P20020 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ATP2B1P20020 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
ATP2B1P20020 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP2B1P20020 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP2B1P20020 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.72■□□□□ 0.75
ATP2B1P20020 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP2B1P20020 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.72■□□□□ 0.75
ATP2B1P20020 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
ATP2B1P20020 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
ATP2B1P20020 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ATP2B1P20020 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.72■□□□□ 0.75
ATP2B1P20020 AF238378.1-201ENST00000526806 358 ntBASIC19.72■□□□□ 0.75
ATP2B1P20020 SART3-203ENST00000546611 1184 ntBASIC19.72■□□□□ 0.75
ATP2B1P20020 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ATP2B1P20020 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ATP2B1P20020 AC064862.7-201ENST00000604520 867 ntBASIC19.72■□□□□ 0.75
ATP2B1P20020 REXO1L6P-202ENST00000619970 1078 ntBASIC19.72■□□□□ 0.75
ATP2B1P20020 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
ATP2B1P20020 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP2B1P20020 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP2B1P20020 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP2B1P20020 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP2B1P20020 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP2B1P20020 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP2B1P20020 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP2B1P20020 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
ATP2B1P20020 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.72■□□□□ 0.75
ATP2B1P20020 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.71■□□□□ 0.75
ATP2B1P20020 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP2B1P20020 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP2B1P20020 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms