Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH1P12830 AC116353.5-201ENST00000638148 1699 ntBASIC16.72■□□□□ 0.27
CDH1P12830 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.72■□□□□ 0.27
CDH1P12830 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH1P12830 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH1P12830 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH1P12830 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.71■□□□□ 0.27
CDH1P12830 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.71■□□□□ 0.27
CDH1P12830 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH1P12830 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH1P12830 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.71■□□□□ 0.27
CDH1P12830 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH1P12830 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH1P12830 AL450487.1-201ENST00000426799 995 ntBASIC16.71■□□□□ 0.27
CDH1P12830 EMBP1-201ENST00000458200 901 ntBASIC16.71■□□□□ 0.27
CDH1P12830 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.71■□□□□ 0.27
CDH1P12830 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.71■□□□□ 0.27
CDH1P12830 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CDH1P12830 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.71■□□□□ 0.27
CDH1P12830 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH1P12830 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CDH1P12830 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.71■□□□□ 0.27
CDH1P12830 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.71■□□□□ 0.27
CDH1P12830 AL139288.1-201ENST00000623748 933 ntBASIC16.71■□□□□ 0.27
CDH1P12830 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.71■□□□□ 0.27
CDH1P12830 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.71■□□□□ 0.27
CDH1P12830 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH1P12830 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.71■□□□□ 0.27
CDH1P12830 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH1P12830 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.71■□□□□ 0.27
CDH1P12830 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CDH1P12830 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CDH1P12830 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CDH1P12830 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.71■□□□□ 0.26
CDH1P12830 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
CDH1P12830 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
CDH1P12830 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH1P12830 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH1P12830 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH1P12830 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH1P12830 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CDH1P12830 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
CDH1P12830 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH1P12830 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
CDH1P12830 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH1P12830 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH1P12830 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH1P12830 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH1P12830 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.7■□□□□ 0.26
CDH1P12830 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.7■□□□□ 0.26
CDH1P12830 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH1P12830 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH1P12830 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH1P12830 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH1P12830 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CDH1P12830 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CDH1P12830 SLC25A1P3-201ENST00000395415 828 ntBASIC16.7■□□□□ 0.26
CDH1P12830 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH1P12830 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.7■□□□□ 0.26
CDH1P12830 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
CDH1P12830 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
CDH1P12830 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CDH1P12830 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.7■□□□□ 0.26
CDH1P12830 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.7■□□□□ 0.26
CDH1P12830 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH1P12830 SART3-203ENST00000546611 1184 ntBASIC16.7■□□□□ 0.26
CDH1P12830 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.7■□□□□ 0.26
CDH1P12830 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.7■□□□□ 0.26
CDH1P12830 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.7■□□□□ 0.26
CDH1P12830 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH1P12830 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CDH1P12830 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CDH1P12830 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH1P12830 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH1P12830 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH1P12830 AC093525.9-201ENST00000624961 1746 ntBASIC16.7■□□□□ 0.26
CDH1P12830 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH1P12830 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CDH1P12830 AC097637.2-201ENST00000624096 1997 ntBASIC16.69■□□□□ 0.26
CDH1P12830 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CDH1P12830 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.69■□□□□ 0.26
CDH1P12830 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDH1P12830 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.69■□□□□ 0.26
CDH1P12830 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDH1P12830 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDH1P12830 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH1P12830 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.69■□□□□ 0.26
CDH1P12830 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDH1P12830 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH1P12830 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.69■□□□□ 0.26
CDH1P12830 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.69■□□□□ 0.26
CDH1P12830 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.69■□□□□ 0.26
CDH1P12830 KRT126P-201ENST00000549467 1181 ntBASIC16.69■□□□□ 0.26
CDH1P12830 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.69■□□□□ 0.26
CDH1P12830 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.69■□□□□ 0.26
CDH1P12830 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDH1P12830 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.69■□□□□ 0.26
CDH1P12830 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.69■□□□□ 0.26
CDH1P12830 PCDHA14-201ENST00000506751 2298 ntBASIC16.69■□□□□ 0.26
CDH1P12830 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms