Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.93■□□□□ 0.3
COL6A2P12110 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.93■□□□□ 0.3
COL6A2P12110 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.93■□□□□ 0.3
COL6A2P12110 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.93■□□□□ 0.3
COL6A2P12110 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.93■□□□□ 0.3
COL6A2P12110 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.93■□□□□ 0.3
COL6A2P12110 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.93■□□□□ 0.3
COL6A2P12110 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
COL6A2P12110 Z69720.1-201ENST00000601483 472 ntBASIC16.93■□□□□ 0.3
COL6A2P12110 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.93■□□□□ 0.3
COL6A2P12110 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL6A2P12110 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL6A2P12110 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL6A2P12110 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
COL6A2P12110 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
COL6A2P12110 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL6A2P12110 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.93■□□□□ 0.3
COL6A2P12110 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL6A2P12110 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL6A2P12110 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL6A2P12110 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.92■□□□□ 0.3
COL6A2P12110 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COL6A2P12110 AC006449.5-201ENST00000610658 2098 ntBASIC16.92■□□□□ 0.3
COL6A2P12110 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL6A2P12110 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
COL6A2P12110 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.92■□□□□ 0.3
COL6A2P12110 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.92■□□□□ 0.3
COL6A2P12110 CYP2T1P-202ENST00000641596 2535 ntBASIC16.92■□□□□ 0.3
COL6A2P12110 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL6A2P12110 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL6A2P12110 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL6A2P12110 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL6A2P12110 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL6A2P12110 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.92■□□□□ 0.3
COL6A2P12110 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.92■□□□□ 0.3
COL6A2P12110 AL020989.1-201ENST00000422979 469 ntBASIC16.92■□□□□ 0.3
COL6A2P12110 DRAXINP1-201ENST00000437611 948 ntBASIC16.92■□□□□ 0.3
COL6A2P12110 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.92■□□□□ 0.3
COL6A2P12110 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL6A2P12110 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.92■□□□□ 0.3
COL6A2P12110 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL6A2P12110 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.92■□□□□ 0.3
COL6A2P12110 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL6A2P12110 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
COL6A2P12110 AC005332.1-201ENST00000577698 1310 ntBASIC16.92■□□□□ 0.3
COL6A2P12110 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COL6A2P12110 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.92■□□□□ 0.3
COL6A2P12110 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL6A2P12110 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL6A2P12110 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL6A2P12110 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL6A2P12110 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL6A2P12110 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
COL6A2P12110 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.91■□□□□ 0.3
COL6A2P12110 AL645728.1-201ENST00000366221 2101 ntBASIC16.91■□□□□ 0.3
COL6A2P12110 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL6A2P12110 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
COL6A2P12110 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL6A2P12110 AC092171.3-201ENST00000610122 2651 ntBASIC16.91■□□□□ 0.3
COL6A2P12110 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL6A2P12110 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.91■□□□□ 0.3
COL6A2P12110 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL6A2P12110 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL6A2P12110 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL6A2P12110 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.91■□□□□ 0.3
COL6A2P12110 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.91■□□□□ 0.3
COL6A2P12110 TMPOP1-202ENST00000424642 1267 ntBASIC16.91■□□□□ 0.3
COL6A2P12110 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.91■□□□□ 0.3
COL6A2P12110 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.91■□□□□ 0.3
COL6A2P12110 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.91■□□□□ 0.3
COL6A2P12110 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
COL6A2P12110 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.91■□□□□ 0.3
COL6A2P12110 AP000867.4-201ENST00000641616 219 ntBASIC16.91■□□□□ 0.3
COL6A2P12110 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL6A2P12110 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL6A2P12110 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL6A2P12110 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.91■□□□□ 0.3
COL6A2P12110 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.91■□□□□ 0.3
COL6A2P12110 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL6A2P12110 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
COL6A2P12110 LINC00554-201ENST00000564841 3011 ntBASIC16.91■□□□□ 0.3
COL6A2P12110 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
COL6A2P12110 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
COL6A2P12110 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL6A2P12110 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
COL6A2P12110 HLA-A-202ENST00000376806 1854 ntBASIC16.9■□□□□ 0.3
COL6A2P12110 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL6A2P12110 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL6A2P12110 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COL6A2P12110 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
COL6A2P12110 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL6A2P12110 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
COL6A2P12110 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL6A2P12110 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
COL6A2P12110 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL6A2P12110 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL6A2P12110 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
COL6A2P12110 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
COL6A2P12110 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL6A2P12110 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms