Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.13■□□□□ 0.33
SRFP11831 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.13■□□□□ 0.33
SRFP11831 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.13■□□□□ 0.33
SRFP11831 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SRFP11831 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRFP11831 TEX28P1-201ENST00000613479 1221 ntBASIC17.13■□□□□ 0.33
SRFP11831 TEX28P2-201ENST00000617764 1221 ntBASIC17.13■□□□□ 0.33
SRFP11831 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRFP11831 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SRFP11831 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.13■□□□□ 0.33
SRFP11831 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SRFP11831 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SRFP11831 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SRFP11831 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
SRFP11831 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.13■□□□□ 0.33
SRFP11831 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SRFP11831 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SRFP11831 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRFP11831 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.12■□□□□ 0.33
SRFP11831 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SRFP11831 CETN4P-206ENST00000642099 2168 ntBASIC17.12■□□□□ 0.33
SRFP11831 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SRFP11831 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SRFP11831 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SRFP11831 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRFP11831 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRFP11831 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SRFP11831 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.12■□□□□ 0.33
SRFP11831 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SRFP11831 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.12■□□□□ 0.33
SRFP11831 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.12■□□□□ 0.33
SRFP11831 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.12■□□□□ 0.33
SRFP11831 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
SRFP11831 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.12■□□□□ 0.33
SRFP11831 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.12■□□□□ 0.33
SRFP11831 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.12■□□□□ 0.33
SRFP11831 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.12■□□□□ 0.33
SRFP11831 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.12■□□□□ 0.33
SRFP11831 GIMAP3P-201ENST00000495150 836 ntBASIC17.12■□□□□ 0.33
SRFP11831 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.12■□□□□ 0.33
SRFP11831 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SRFP11831 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SRFP11831 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.12■□□□□ 0.33
SRFP11831 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.12■□□□□ 0.33
SRFP11831 AL844908.2-201ENST00000609461 460 ntBASIC17.12■□□□□ 0.33
SRFP11831 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.12■□□□□ 0.33
SRFP11831 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SRFP11831 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SRFP11831 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SRFP11831 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRFP11831 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.11■□□□□ 0.33
SRFP11831 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRFP11831 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SRFP11831 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRFP11831 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.11■□□□□ 0.33
SRFP11831 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.11■□□□□ 0.33
SRFP11831 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.11■□□□□ 0.33
SRFP11831 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRFP11831 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRFP11831 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRFP11831 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRFP11831 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.11■□□□□ 0.33
SRFP11831 HILS1-202ENST00000545329 423 ntBASIC17.11■□□□□ 0.33
SRFP11831 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SRFP11831 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.11■□□□□ 0.33
SRFP11831 AP000974.1-201ENST00000623909 2387 ntBASIC17.11■□□□□ 0.33
SRFP11831 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRFP11831 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.11■□□□□ 0.33
SRFP11831 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
SRFP11831 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRFP11831 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.11■□□□□ 0.33
SRFP11831 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SRFP11831 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRFP11831 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.11■□□□□ 0.33
SRFP11831 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.11■□□□□ 0.33
SRFP11831 EGFEM1P-202ENST00000431685 1563 ntBASIC17.11■□□□□ 0.33
SRFP11831 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SRFP11831 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRFP11831 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRFP11831 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.1■□□□□ 0.33
SRFP11831 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.1■□□□□ 0.33
SRFP11831 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.1■□□□□ 0.33
SRFP11831 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRFP11831 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRFP11831 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.1■□□□□ 0.33
SRFP11831 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRFP11831 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRFP11831 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRFP11831 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRFP11831 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.1■□□□□ 0.33
SRFP11831 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRFP11831 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRFP11831 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.1■□□□□ 0.33
SRFP11831 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
SRFP11831 AC010336.2-201ENST00000564226 506 ntBASIC17.1■□□□□ 0.33
SRFP11831 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRFP11831 AC017083.2-201ENST00000608069 979 ntBASIC17.1■□□□□ 0.33
SRFP11831 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.1■□□□□ 0.33
SRFP11831 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.1■□□□□ 0.33
SRFP11831 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms