Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CD28P10747 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CD28P10747 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.39□□□□□ -0.27
CD28P10747 FAM58CP-201ENST00000435741 640 ntBASIC13.39□□□□□ -0.27
CD28P10747 HMGN1P19-201ENST00000436976 333 ntBASIC13.39□□□□□ -0.27
CD28P10747 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC13.39□□□□□ -0.27
CD28P10747 AL031432.2-201ENST00000566714 459 ntBASIC13.39□□□□□ -0.27
CD28P10747 AL928711.1-201ENST00000570165 459 ntBASIC13.39□□□□□ -0.27
CD28P10747 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.39□□□□□ -0.27
CD28P10747 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.39□□□□□ -0.27
CD28P10747 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.39□□□□□ -0.27
CD28P10747 TK1-204ENST00000590430 683 ntTSL 3 BASIC13.39□□□□□ -0.27
CD28P10747 AL139327.4-201ENST00000612362 153 ntBASIC13.39□□□□□ -0.27
CD28P10747 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC13.39□□□□□ -0.27
CD28P10747 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD28P10747 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC13.39□□□□□ -0.27
CD28P10747 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC13.39□□□□□ -0.27
CD28P10747 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
CD28P10747 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD28P10747 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CD28P10747 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC13.39□□□□□ -0.27
CD28P10747 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CD28P10747 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD28P10747 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CD28P10747 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CD28P10747 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD28P10747 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CD28P10747 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CD28P10747 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
CD28P10747 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CD28P10747 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD28P10747 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD28P10747 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD28P10747 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD28P10747 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD28P10747 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
CD28P10747 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC13.38□□□□□ -0.27
CD28P10747 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD28P10747 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CD28P10747 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD28P10747 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD28P10747 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC13.38□□□□□ -0.27
CD28P10747 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD28P10747 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD28P10747 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.38□□□□□ -0.27
CD28P10747 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
CD28P10747 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.38□□□□□ -0.27
CD28P10747 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.38□□□□□ -0.27
CD28P10747 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD28P10747 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.38□□□□□ -0.27
CD28P10747 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.38□□□□□ -0.27
CD28P10747 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.38□□□□□ -0.27
CD28P10747 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.38□□□□□ -0.27
CD28P10747 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC13.38□□□□□ -0.27
CD28P10747 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.38□□□□□ -0.27
CD28P10747 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CD28P10747 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
CD28P10747 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC13.38□□□□□ -0.27
CD28P10747 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC13.38□□□□□ -0.27
CD28P10747 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD28P10747 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC13.38□□□□□ -0.27
CD28P10747 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC13.38□□□□□ -0.27
CD28P10747 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.38□□□□□ -0.27
CD28P10747 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC13.38□□□□□ -0.27
CD28P10747 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD28P10747 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD28P10747 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD28P10747 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CD28P10747 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CD28P10747 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD28P10747 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD28P10747 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CD28P10747 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CD28P10747 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CD28P10747 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD28P10747 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC13.37□□□□□ -0.27
CD28P10747 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD28P10747 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CD28P10747 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD28P10747 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CD28P10747 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD28P10747 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC13.37□□□□□ -0.27
CD28P10747 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC13.37□□□□□ -0.27
CD28P10747 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CD28P10747 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.37□□□□□ -0.27
CD28P10747 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.37□□□□□ -0.27
CD28P10747 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CD28P10747 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
CD28P10747 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC13.37□□□□□ -0.27
CD28P10747 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC13.37□□□□□ -0.27
CD28P10747 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.37□□□□□ -0.27
CD28P10747 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.37□□□□□ -0.27
CD28P10747 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.37□□□□□ -0.27
CD28P10747 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.37□□□□□ -0.27
CD28P10747 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.37□□□□□ -0.27
CD28P10747 LINC01451-201ENST00000623792 534 ntBASIC13.37□□□□□ -0.27
CD28P10747 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CD28P10747 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CD28P10747 NOC2LP1-202ENST00000452600 2235 ntBASIC13.37□□□□□ -0.27
CD28P10747 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms