Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TPM3P06753 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC19.24■□□□□ 0.67
TPM3P06753 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TPM3P06753 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TPM3P06753 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TPM3P06753 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.23■□□□□ 0.67
TPM3P06753 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.23■□□□□ 0.67
TPM3P06753 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.23■□□□□ 0.67
TPM3P06753 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TPM3P06753 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TPM3P06753 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TPM3P06753 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TPM3P06753 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
TPM3P06753 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TPM3P06753 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TPM3P06753 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TPM3P06753 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TPM3P06753 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TPM3P06753 ECEL1P2-202ENST00000465689 757 ntBASIC19.23■□□□□ 0.67
TPM3P06753 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.23■□□□□ 0.67
TPM3P06753 AC104640.1-201ENST00000562617 2109 ntBASIC19.23■□□□□ 0.67
TPM3P06753 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TPM3P06753 AC010947.1-201ENST00000623454 693 ntBASIC19.23■□□□□ 0.67
TPM3P06753 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TPM3P06753 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TPM3P06753 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TPM3P06753 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TPM3P06753 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.23■□□□□ 0.67
TPM3P06753 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TPM3P06753 AL662844.4-201ENST00000606367 2838 ntBASIC19.23■□□□□ 0.67
TPM3P06753 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TPM3P06753 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TPM3P06753 CYP2D8P-201ENST00000433633 1490 ntBASIC19.22■□□□□ 0.67
TPM3P06753 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.22■□□□□ 0.67
TPM3P06753 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC19.22■□□□□ 0.67
TPM3P06753 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.22■□□□□ 0.67
TPM3P06753 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TPM3P06753 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TPM3P06753 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TPM3P06753 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TPM3P06753 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC19.22■□□□□ 0.67
TPM3P06753 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TPM3P06753 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TPM3P06753 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
TPM3P06753 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TPM3P06753 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
TPM3P06753 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TPM3P06753 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TPM3P06753 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.22■□□□□ 0.67
TPM3P06753 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.22■□□□□ 0.67
TPM3P06753 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
TPM3P06753 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TPM3P06753 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.22■□□□□ 0.67
TPM3P06753 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TPM3P06753 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TPM3P06753 AL391807.1-203ENST00000604392 2365 ntBASIC19.22■□□□□ 0.67
TPM3P06753 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TPM3P06753 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TPM3P06753 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TPM3P06753 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TPM3P06753 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TPM3P06753 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC19.22■□□□□ 0.67
TPM3P06753 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TPM3P06753 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.22■□□□□ 0.67
TPM3P06753 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.22■□□□□ 0.67
TPM3P06753 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TPM3P06753 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TPM3P06753 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TPM3P06753 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
TPM3P06753 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TPM3P06753 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
TPM3P06753 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TPM3P06753 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TPM3P06753 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TPM3P06753 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TPM3P06753 TSPY26P-202ENST00000565928 3884 ntBASIC19.21■□□□□ 0.67
TPM3P06753 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TPM3P06753 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.21■□□□□ 0.67
TPM3P06753 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TPM3P06753 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TPM3P06753 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TPM3P06753 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.21■□□□□ 0.67
TPM3P06753 AC096633.1-201ENST00000422446 749 ntBASIC19.21■□□□□ 0.67
TPM3P06753 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.21■□□□□ 0.67
TPM3P06753 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TPM3P06753 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.21■□□□□ 0.67
TPM3P06753 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.21■□□□□ 0.67
TPM3P06753 GCSHP2-201ENST00000560971 527 ntBASIC19.21■□□□□ 0.67
TPM3P06753 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
TPM3P06753 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TPM3P06753 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.21■□□□□ 0.67
TPM3P06753 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.21■□□□□ 0.67
TPM3P06753 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TPM3P06753 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TPM3P06753 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.21■□□□□ 0.67
TPM3P06753 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TPM3P06753 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TPM3P06753 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TPM3P06753 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.21■□□□□ 0.67
TPM3P06753 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms