Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV12-3P01733 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV12-3P01733 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV12-3P01733 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV12-3P01733 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV12-3P01733 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
TRBV12-3P01733 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV12-3P01733 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC13.23□□□□□ -0.29
TRBV12-3P01733 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC13.23□□□□□ -0.29
TRBV12-3P01733 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV12-3P01733 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV12-3P01733 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
TRBV12-3P01733 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC13.23□□□□□ -0.29
TRBV12-3P01733 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV12-3P01733 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV12-3P01733 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV12-3P01733 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TRBV12-3P01733 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV12-3P01733 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TRBV12-3P01733 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV12-3P01733 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.23□□□□□ -0.29
TRBV12-3P01733 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV12-3P01733 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV12-3P01733 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.23□□□□□ -0.29
TRBV12-3P01733 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC13.23□□□□□ -0.29
TRBV12-3P01733 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV12-3P01733 RPS15P9-201ENST00000494093 319 ntBASIC13.23□□□□□ -0.29
TRBV12-3P01733 AC093909.1-201ENST00000504731 1122 ntBASIC13.23□□□□□ -0.29
TRBV12-3P01733 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV12-3P01733 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC13.23□□□□□ -0.29
TRBV12-3P01733 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC13.23□□□□□ -0.29
TRBV12-3P01733 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.23□□□□□ -0.29
TRBV12-3P01733 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC13.23□□□□□ -0.29
TRBV12-3P01733 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
TRBV12-3P01733 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
TRBV12-3P01733 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC13.23□□□□□ -0.29
TRBV12-3P01733 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV12-3P01733 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV12-3P01733 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC13.23□□□□□ -0.29
TRBV12-3P01733 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV12-3P01733 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV12-3P01733 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV12-3P01733 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV12-3P01733 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV12-3P01733 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TRBV12-3P01733 STX3-203ENST00000529177 1571 ntTSL 2 BASIC13.23□□□□□ -0.29
TRBV12-3P01733 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV12-3P01733 FRMD8P1-201ENST00000440433 1524 ntBASIC13.23□□□□□ -0.29
TRBV12-3P01733 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV12-3P01733 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV12-3P01733 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV12-3P01733 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV12-3P01733 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV12-3P01733 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
TRBV12-3P01733 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV12-3P01733 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
TRBV12-3P01733 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV12-3P01733 PI4KAP1-204ENST00000612579 1703 ntBASIC13.22□□□□□ -0.29
TRBV12-3P01733 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV12-3P01733 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC13.22□□□□□ -0.29
TRBV12-3P01733 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV12-3P01733 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV12-3P01733 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC13.22□□□□□ -0.29
TRBV12-3P01733 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV12-3P01733 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC13.22□□□□□ -0.29
TRBV12-3P01733 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV12-3P01733 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV12-3P01733 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
TRBV12-3P01733 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV12-3P01733 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV12-3P01733 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV12-3P01733 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV12-3P01733 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV12-3P01733 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13.22□□□□□ -0.29
TRBV12-3P01733 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
TRBV12-3P01733 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC13.22□□□□□ -0.29
TRBV12-3P01733 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC13.22□□□□□ -0.29
TRBV12-3P01733 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC13.22□□□□□ -0.29
TRBV12-3P01733 ETFA-208ENST00000559602 792 ntTSL 3 BASIC13.22□□□□□ -0.29
TRBV12-3P01733 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC13.22□□□□□ -0.29
TRBV12-3P01733 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC13.22□□□□□ -0.29
TRBV12-3P01733 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV12-3P01733 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC13.22□□□□□ -0.29
TRBV12-3P01733 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC13.22□□□□□ -0.29
TRBV12-3P01733 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.22□□□□□ -0.29
TRBV12-3P01733 AL805961.1-202ENST00000641562 540 ntBASIC13.22□□□□□ -0.29
TRBV12-3P01733 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
TRBV12-3P01733 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV12-3P01733 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC13.22□□□□□ -0.29
TRBV12-3P01733 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV12-3P01733 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
TRBV12-3P01733 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV12-3P01733 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV12-3P01733 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV12-3P01733 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV12-3P01733 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV12-3P01733 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV12-3P01733 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
TRBV12-3P01733 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV12-3P01733 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms