Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSPG5O95196 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CSPG5O95196 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSPG5O95196 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSPG5O95196 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CSPG5O95196 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSPG5O95196 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSPG5O95196 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.36■□□□□ 0.53
CSPG5O95196 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.36■□□□□ 0.53
CSPG5O95196 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSPG5O95196 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.36■□□□□ 0.53
CSPG5O95196 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CSPG5O95196 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CSPG5O95196 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSPG5O95196 CROCCP1-201ENST00000426910 5675 ntBASIC18.36■□□□□ 0.53
CSPG5O95196 SPDYE11-202ENST00000450699 704 ntBASIC18.36■□□□□ 0.53
CSPG5O95196 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.36■□□□□ 0.53
CSPG5O95196 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.36■□□□□ 0.53
CSPG5O95196 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSPG5O95196 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.36■□□□□ 0.53
CSPG5O95196 SPDYE9P-201ENST00000570642 692 ntBASIC18.36■□□□□ 0.53
CSPG5O95196 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSPG5O95196 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.36■□□□□ 0.53
CSPG5O95196 SPDYE10P-202ENST00000612005 668 ntBASIC18.36■□□□□ 0.53
CSPG5O95196 SPDYE8P-202ENST00000612377 668 ntBASIC18.36■□□□□ 0.53
CSPG5O95196 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSPG5O95196 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSPG5O95196 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSPG5O95196 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSPG5O95196 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSPG5O95196 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSPG5O95196 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSPG5O95196 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CSPG5O95196 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSPG5O95196 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSPG5O95196 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSPG5O95196 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSPG5O95196 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CSPG5O95196 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CSPG5O95196 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.35■□□□□ 0.53
CSPG5O95196 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSPG5O95196 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSPG5O95196 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSPG5O95196 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSPG5O95196 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSPG5O95196 AC236430.1-201ENST00000402231 743 ntBASIC18.35■□□□□ 0.53
CSPG5O95196 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.35■□□□□ 0.53
CSPG5O95196 PMS2P4-201ENST00000412466 1052 ntBASIC18.35■□□□□ 0.53
CSPG5O95196 AL355306.1-201ENST00000415580 579 ntBASIC18.35■□□□□ 0.53
CSPG5O95196 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.35■□□□□ 0.53
CSPG5O95196 FAM185BP-201ENST00000443595 716 ntBASIC18.35■□□□□ 0.53
CSPG5O95196 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.35■□□□□ 0.53
CSPG5O95196 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.35■□□□□ 0.53
CSPG5O95196 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.35■□□□□ 0.53
CSPG5O95196 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSPG5O95196 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CSPG5O95196 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
CSPG5O95196 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.35■□□□□ 0.53
CSPG5O95196 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CSPG5O95196 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSPG5O95196 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.35■□□□□ 0.53
CSPG5O95196 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSPG5O95196 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSPG5O95196 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSPG5O95196 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSPG5O95196 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSPG5O95196 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CSPG5O95196 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.34■□□□□ 0.53
CSPG5O95196 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSPG5O95196 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CSPG5O95196 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSPG5O95196 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSPG5O95196 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSPG5O95196 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CSPG5O95196 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.34■□□□□ 0.53
CSPG5O95196 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSPG5O95196 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSPG5O95196 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSPG5O95196 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CSPG5O95196 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSPG5O95196 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CSPG5O95196 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CSPG5O95196 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSPG5O95196 AL671277.1-201ENST00000429656 993 ntBASIC18.34■□□□□ 0.53
CSPG5O95196 SLC25A6P2-201ENST00000497974 877 ntBASIC18.34■□□□□ 0.53
CSPG5O95196 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.34■□□□□ 0.53
CSPG5O95196 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.34■□□□□ 0.53
CSPG5O95196 AC026120.1-201ENST00000611536 926 ntBASIC18.34■□□□□ 0.53
CSPG5O95196 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.34■□□□□ 0.53
CSPG5O95196 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CSPG5O95196 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.34■□□□□ 0.53
CSPG5O95196 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CSPG5O95196 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CSPG5O95196 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.34■□□□□ 0.53
CSPG5O95196 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CSPG5O95196 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.34■□□□□ 0.53
CSPG5O95196 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSPG5O95196 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.34■□□□□ 0.53
CSPG5O95196 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CSPG5O95196 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms