Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.93□□□□□ -0.02
UPK1BO75841 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
UPK1BO75841 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
UPK1BO75841 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
UPK1BO75841 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
UPK1BO75841 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.93□□□□□ -0.02
UPK1BO75841 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UPK1BO75841 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
UPK1BO75841 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UPK1BO75841 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UPK1BO75841 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.92□□□□□ -0.02
UPK1BO75841 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
UPK1BO75841 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
UPK1BO75841 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.92□□□□□ -0.02
UPK1BO75841 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UPK1BO75841 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UPK1BO75841 AC068587.6-202ENST00000641839 5619 ntBASIC14.92□□□□□ -0.02
UPK1BO75841 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
UPK1BO75841 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.92□□□□□ -0.02
UPK1BO75841 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
UPK1BO75841 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
UPK1BO75841 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
UPK1BO75841 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UPK1BO75841 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
UPK1BO75841 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.92□□□□□ -0.02
UPK1BO75841 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC14.92□□□□□ -0.02
UPK1BO75841 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UPK1BO75841 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UPK1BO75841 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.92□□□□□ -0.02
UPK1BO75841 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
UPK1BO75841 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.92□□□□□ -0.02
UPK1BO75841 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.92□□□□□ -0.02
UPK1BO75841 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
UPK1BO75841 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
UPK1BO75841 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UPK1BO75841 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
UPK1BO75841 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
UPK1BO75841 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
UPK1BO75841 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC14.92□□□□□ -0.02
UPK1BO75841 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UPK1BO75841 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
UPK1BO75841 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
UPK1BO75841 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
UPK1BO75841 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.91□□□□□ -0.02
UPK1BO75841 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UPK1BO75841 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
UPK1BO75841 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
UPK1BO75841 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
UPK1BO75841 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UPK1BO75841 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
UPK1BO75841 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
UPK1BO75841 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.91□□□□□ -0.02
UPK1BO75841 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
UPK1BO75841 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
UPK1BO75841 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UPK1BO75841 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UPK1BO75841 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC14.91□□□□□ -0.02
UPK1BO75841 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
UPK1BO75841 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC14.91□□□□□ -0.02
UPK1BO75841 GATS-209ENST00000454084 1030 ntTSL 3 BASIC14.91□□□□□ -0.02
UPK1BO75841 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UPK1BO75841 SOX15-203ENST00000570788 1093 ntBASIC14.91□□□□□ -0.02
UPK1BO75841 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
UPK1BO75841 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UPK1BO75841 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.91□□□□□ -0.02
UPK1BO75841 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.91□□□□□ -0.02
UPK1BO75841 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
UPK1BO75841 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC14.91□□□□□ -0.02
UPK1BO75841 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
UPK1BO75841 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.91□□□□□ -0.02
UPK1BO75841 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UPK1BO75841 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
UPK1BO75841 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.91□□□□□ -0.02
UPK1BO75841 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.91□□□□□ -0.02
UPK1BO75841 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UPK1BO75841 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
UPK1BO75841 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
UPK1BO75841 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
UPK1BO75841 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
UPK1BO75841 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.9□□□□□ -0.02
UPK1BO75841 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.9□□□□□ -0.02
UPK1BO75841 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.9□□□□□ -0.02
UPK1BO75841 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
UPK1BO75841 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.9□□□□□ -0.02
UPK1BO75841 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.9□□□□□ -0.02
UPK1BO75841 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
UPK1BO75841 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UPK1BO75841 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.9□□□□□ -0.02
UPK1BO75841 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
UPK1BO75841 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
UPK1BO75841 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
UPK1BO75841 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
UPK1BO75841 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
UPK1BO75841 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
UPK1BO75841 AC007292.2-201ENST00000593524 1812 ntBASIC14.9□□□□□ -0.02
UPK1BO75841 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.9□□□□□ -0.02
UPK1BO75841 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.9□□□□□ -0.02
UPK1BO75841 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
UPK1BO75841 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UPK1BO75841 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms