Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
KLHL41O60662 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KLHL41O60662 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
KLHL41O60662 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.04■□□□□ 0.32
KLHL41O60662 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
KLHL41O60662 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
KLHL41O60662 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.04■□□□□ 0.32
KLHL41O60662 KRT8P10-201ENST00000450021 1447 ntBASIC17.04■□□□□ 0.32
KLHL41O60662 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.04■□□□□ 0.32
KLHL41O60662 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
KLHL41O60662 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KLHL41O60662 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
KLHL41O60662 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KLHL41O60662 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.03■□□□□ 0.32
KLHL41O60662 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.03■□□□□ 0.32
KLHL41O60662 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.03■□□□□ 0.32
KLHL41O60662 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
KLHL41O60662 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.03■□□□□ 0.32
KLHL41O60662 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KLHL41O60662 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KLHL41O60662 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KLHL41O60662 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
KLHL41O60662 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KLHL41O60662 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.03■□□□□ 0.32
KLHL41O60662 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KLHL41O60662 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
KLHL41O60662 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.03■□□□□ 0.32
KLHL41O60662 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KLHL41O60662 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.03■□□□□ 0.32
KLHL41O60662 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.03■□□□□ 0.32
KLHL41O60662 RNF126P1-202ENST00000569893 925 ntBASIC17.03■□□□□ 0.32
KLHL41O60662 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KLHL41O60662 LINC02012-201ENST00000608206 1725 ntBASIC17.03■□□□□ 0.32
KLHL41O60662 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KLHL41O60662 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.03■□□□□ 0.32
KLHL41O60662 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KLHL41O60662 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.03■□□□□ 0.32
KLHL41O60662 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
KLHL41O60662 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.03■□□□□ 0.32
KLHL41O60662 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KLHL41O60662 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.03■□□□□ 0.32
KLHL41O60662 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.03■□□□□ 0.32
KLHL41O60662 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.03■□□□□ 0.32
KLHL41O60662 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KLHL41O60662 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KLHL41O60662 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.03■□□□□ 0.32
KLHL41O60662 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
KLHL41O60662 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KLHL41O60662 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KLHL41O60662 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KLHL41O60662 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
KLHL41O60662 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
KLHL41O60662 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.02■□□□□ 0.32
KLHL41O60662 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.02■□□□□ 0.32
KLHL41O60662 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.02■□□□□ 0.32
KLHL41O60662 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KLHL41O60662 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
KLHL41O60662 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
KLHL41O60662 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KLHL41O60662 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
KLHL41O60662 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
KLHL41O60662 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KLHL41O60662 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KLHL41O60662 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KLHL41O60662 IGHGP-201ENST00000390555 1178 ntBASIC17.02■□□□□ 0.32
KLHL41O60662 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KLHL41O60662 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.02■□□□□ 0.32
KLHL41O60662 AC246785.2-201ENST00000432512 513 ntBASIC17.02■□□□□ 0.32
KLHL41O60662 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.02■□□□□ 0.32
KLHL41O60662 FDX1P1-201ENST00000449115 551 ntBASIC17.02■□□□□ 0.32
KLHL41O60662 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.02■□□□□ 0.32
KLHL41O60662 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.02■□□□□ 0.32
KLHL41O60662 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
KLHL41O60662 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.02■□□□□ 0.32
KLHL41O60662 AL662844.1-201ENST00000546340 181 ntBASIC17.02■□□□□ 0.32
KLHL41O60662 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
KLHL41O60662 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.02■□□□□ 0.32
KLHL41O60662 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KLHL41O60662 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
KLHL41O60662 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
KLHL41O60662 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
KLHL41O60662 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
KLHL41O60662 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
KLHL41O60662 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
KLHL41O60662 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
KLHL41O60662 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
KLHL41O60662 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
KLHL41O60662 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
KLHL41O60662 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
KLHL41O60662 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.02■□□□□ 0.31
KLHL41O60662 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
KLHL41O60662 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
KLHL41O60662 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KLHL41O60662 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.01■□□□□ 0.31
KLHL41O60662 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
KLHL41O60662 AL391005.1-201ENST00000623953 2435 ntBASIC17.01■□□□□ 0.31
KLHL41O60662 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KLHL41O60662 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KLHL41O60662 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KLHL41O60662 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms