Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.23■□□□□ 0.67
CHMP2AO43633 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP2AO43633 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP2AO43633 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP2AO43633 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.23■□□□□ 0.67
CHMP2AO43633 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.23■□□□□ 0.67
CHMP2AO43633 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CHMP2AO43633 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP2AO43633 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP2AO43633 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP2AO43633 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP2AO43633 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP2AO43633 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CHMP2AO43633 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CHMP2AO43633 PRSS29P-201ENST00000440800 595 ntBASIC19.23■□□□□ 0.67
CHMP2AO43633 SLC25A6P2-201ENST00000497974 877 ntBASIC19.23■□□□□ 0.67
CHMP2AO43633 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.23■□□□□ 0.67
CHMP2AO43633 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP2AO43633 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP2AO43633 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP2AO43633 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CHMP2AO43633 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
CHMP2AO43633 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.23■□□□□ 0.67
CHMP2AO43633 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP2AO43633 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CHMP2AO43633 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CHMP2AO43633 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.23■□□□□ 0.67
CHMP2AO43633 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP2AO43633 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP2AO43633 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CHMP2AO43633 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.23■□□□□ 0.67
CHMP2AO43633 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP2AO43633 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP2AO43633 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP2AO43633 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP2AO43633 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.22■□□□□ 0.67
CHMP2AO43633 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP2AO43633 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP2AO43633 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP2AO43633 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP2AO43633 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP2AO43633 IGLL3P-201ENST00000412472 434 ntBASIC19.22■□□□□ 0.67
CHMP2AO43633 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.22■□□□□ 0.67
CHMP2AO43633 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CHMP2AO43633 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.22■□□□□ 0.67
CHMP2AO43633 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.22■□□□□ 0.67
CHMP2AO43633 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP2AO43633 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP2AO43633 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP2AO43633 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.22■□□□□ 0.67
CHMP2AO43633 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.22■□□□□ 0.67
CHMP2AO43633 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP2AO43633 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP2AO43633 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP2AO43633 AC092053.1-201ENST00000605787 1936 ntBASIC19.21■□□□□ 0.67
CHMP2AO43633 AL645608.8-201ENST00000606034 2086 ntBASIC19.21■□□□□ 0.67
CHMP2AO43633 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP2AO43633 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP2AO43633 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.21■□□□□ 0.67
CHMP2AO43633 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP2AO43633 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP2AO43633 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP2AO43633 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP2AO43633 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP2AO43633 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.21■□□□□ 0.67
CHMP2AO43633 HCG4B-203ENST00000450128 991 ntBASIC19.21■□□□□ 0.67
CHMP2AO43633 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.21■□□□□ 0.67
CHMP2AO43633 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.21■□□□□ 0.67
CHMP2AO43633 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.21■□□□□ 0.67
CHMP2AO43633 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.21■□□□□ 0.67
CHMP2AO43633 AC108860.2-201ENST00000562760 2183 ntBASIC19.21■□□□□ 0.67
CHMP2AO43633 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.21■□□□□ 0.67
CHMP2AO43633 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP2AO43633 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP2AO43633 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CHMP2AO43633 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP2AO43633 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP2AO43633 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP2AO43633 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP2AO43633 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP2AO43633 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP2AO43633 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP2AO43633 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP2AO43633 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP2AO43633 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP2AO43633 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.2■□□□□ 0.66
CHMP2AO43633 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP2AO43633 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP2AO43633 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP2AO43633 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP2AO43633 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP2AO43633 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP2AO43633 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CHMP2AO43633 AC023274.1-201ENST00000418278 595 ntBASIC19.2■□□□□ 0.66
CHMP2AO43633 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.2■□□□□ 0.66
CHMP2AO43633 PGAM5P1-201ENST00000518923 814 ntBASIC19.2■□□□□ 0.66
CHMP2AO43633 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.2■□□□□ 0.66
CHMP2AO43633 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.2■□□□□ 0.66
CHMP2AO43633 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.2■□□□□ 0.66
CHMP2AO43633 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms