Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
PAX4O43316 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC12.28□□□□□ -0.44
PAX4O43316 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
PAX4O43316 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
PAX4O43316 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC12.28□□□□□ -0.44
PAX4O43316 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PAX4O43316 AL353593.2-201ENST00000602529 1483 ntBASIC12.27□□□□□ -0.44
PAX4O43316 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
PAX4O43316 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
PAX4O43316 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC12.27□□□□□ -0.44
PAX4O43316 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
PAX4O43316 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
PAX4O43316 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC12.27□□□□□ -0.44
PAX4O43316 AC009053.2-201ENST00000563701 2365 ntBASIC12.27□□□□□ -0.44
PAX4O43316 AC099398.1-201ENST00000567919 2776 ntBASIC12.27□□□□□ -0.44
PAX4O43316 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC12.27□□□□□ -0.44
PAX4O43316 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
PAX4O43316 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
PAX4O43316 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
PAX4O43316 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC12.27□□□□□ -0.44
PAX4O43316 AL023806.1-201ENST00000603994 1649 ntBASIC12.27□□□□□ -0.44
PAX4O43316 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
PAX4O43316 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC12.27□□□□□ -0.45
PAX4O43316 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PAX4O43316 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PAX4O43316 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
PAX4O43316 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC12.27□□□□□ -0.45
PAX4O43316 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC12.27□□□□□ -0.45
PAX4O43316 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PAX4O43316 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
PAX4O43316 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
PAX4O43316 SOD2-201ENST00000337404 991 ntTSL 2 BASIC12.27□□□□□ -0.45
PAX4O43316 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
PAX4O43316 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PAX4O43316 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC12.27□□□□□ -0.45
PAX4O43316 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
PAX4O43316 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC12.27□□□□□ -0.45
PAX4O43316 ABCD1P5-201ENST00000445663 754 ntBASIC12.27□□□□□ -0.45
PAX4O43316 KRT18P31-201ENST00000506277 1292 ntBASIC12.27□□□□□ -0.45
PAX4O43316 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
PAX4O43316 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC12.27□□□□□ -0.45
PAX4O43316 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
PAX4O43316 STK25P1-201ENST00000585406 838 ntBASIC12.27□□□□□ -0.45
PAX4O43316 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC12.27□□□□□ -0.45
PAX4O43316 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC12.27□□□□□ -0.45
PAX4O43316 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
PAX4O43316 CLEC4GP1-201ENST00000596555 870 ntBASIC12.27□□□□□ -0.45
PAX4O43316 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PAX4O43316 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
PAX4O43316 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
PAX4O43316 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC12.27□□□□□ -0.45
PAX4O43316 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
PAX4O43316 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
PAX4O43316 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
PAX4O43316 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PAX4O43316 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PAX4O43316 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC12.27□□□□□ -0.45
PAX4O43316 AC046185.3-201ENST00000623228 1824 ntBASIC12.27□□□□□ -0.45
PAX4O43316 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PAX4O43316 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
PAX4O43316 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
PAX4O43316 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
PAX4O43316 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
PAX4O43316 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC12.27□□□□□ -0.45
PAX4O43316 AC016396.2-201ENST00000562575 1417 ntBASIC12.27□□□□□ -0.45
PAX4O43316 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PAX4O43316 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PAX4O43316 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC12.27□□□□□ -0.45
PAX4O43316 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC12.27□□□□□ -0.45
PAX4O43316 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC12.27□□□□□ -0.45
PAX4O43316 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PAX4O43316 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
PAX4O43316 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PAX4O43316 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PAX4O43316 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PAX4O43316 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
PAX4O43316 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PAX4O43316 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PAX4O43316 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
PAX4O43316 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PAX4O43316 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
PAX4O43316 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
PAX4O43316 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
PAX4O43316 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PAX4O43316 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC12.26□□□□□ -0.45
PAX4O43316 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PAX4O43316 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PAX4O43316 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
PAX4O43316 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC12.26□□□□□ -0.45
PAX4O43316 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
PAX4O43316 AC132008.2-207ENST00000454517 770 ntBASIC12.26□□□□□ -0.45
PAX4O43316 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC12.26□□□□□ -0.45
PAX4O43316 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC12.26□□□□□ -0.45
PAX4O43316 SDHD-206ENST00000528182 754 ntTSL 3 BASIC12.26□□□□□ -0.45
PAX4O43316 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC12.26□□□□□ -0.45
PAX4O43316 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PAX4O43316 TK1-204ENST00000590430 683 ntTSL 3 BASIC12.26□□□□□ -0.45
PAX4O43316 AL732292.2-201ENST00000609649 430 ntBASIC12.26□□□□□ -0.45
PAX4O43316 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
PAX4O43316 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms