Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN9O14815 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN9O14815 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.1■□□□□ 0.49
CAPN9O14815 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.1■□□□□ 0.49
CAPN9O14815 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN9O14815 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CAPN9O14815 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN9O14815 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.1■□□□□ 0.49
CAPN9O14815 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN9O14815 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN9O14815 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN9O14815 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.1■□□□□ 0.49
CAPN9O14815 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN9O14815 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.1■□□□□ 0.49
CAPN9O14815 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.1■□□□□ 0.49
CAPN9O14815 MRPL3P1-201ENST00000400109 1033 ntBASIC18.1■□□□□ 0.49
CAPN9O14815 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CAPN9O14815 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.1■□□□□ 0.49
CAPN9O14815 ACTG1P4-201ENST00000425123 1122 ntBASIC18.1■□□□□ 0.49
CAPN9O14815 LAGE3P1-201ENST00000425356 484 ntBASIC18.1■□□□□ 0.49
CAPN9O14815 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.1■□□□□ 0.49
CAPN9O14815 AC018712.1-201ENST00000455767 687 ntBASIC18.1■□□□□ 0.49
CAPN9O14815 AC009078.2-202ENST00000463353 338 ntBASIC18.1■□□□□ 0.49
CAPN9O14815 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.1■□□□□ 0.49
CAPN9O14815 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.1■□□□□ 0.49
CAPN9O14815 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.1■□□□□ 0.49
CAPN9O14815 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.1■□□□□ 0.49
CAPN9O14815 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.1■□□□□ 0.49
CAPN9O14815 AC148477.8-201ENST00000624298 468 ntBASIC18.1■□□□□ 0.49
CAPN9O14815 AC107918.4-202ENST00000641623 219 ntBASIC18.1■□□□□ 0.49
CAPN9O14815 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.1■□□□□ 0.49
CAPN9O14815 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.1■□□□□ 0.49
CAPN9O14815 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.1■□□□□ 0.49
CAPN9O14815 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN9O14815 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN9O14815 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN9O14815 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CAPN9O14815 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CAPN9O14815 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CAPN9O14815 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CAPN9O14815 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
CAPN9O14815 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.09■□□□□ 0.49
CAPN9O14815 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CAPN9O14815 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.09■□□□□ 0.49
CAPN9O14815 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.09■□□□□ 0.49
CAPN9O14815 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.09■□□□□ 0.49
CAPN9O14815 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CAPN9O14815 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CAPN9O14815 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CAPN9O14815 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CAPN9O14815 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.09■□□□□ 0.49
CAPN9O14815 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.09■□□□□ 0.49
CAPN9O14815 AC093909.1-201ENST00000504731 1122 ntBASIC18.09■□□□□ 0.49
CAPN9O14815 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.09■□□□□ 0.49
CAPN9O14815 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CAPN9O14815 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.09■□□□□ 0.49
CAPN9O14815 AC006557.2-201ENST00000592985 1240 ntBASIC18.09■□□□□ 0.49
CAPN9O14815 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.09■□□□□ 0.49
CAPN9O14815 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CAPN9O14815 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CAPN9O14815 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CAPN9O14815 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CAPN9O14815 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CAPN9O14815 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CAPN9O14815 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CAPN9O14815 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.09■□□□□ 0.49
CAPN9O14815 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CAPN9O14815 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.09■□□□□ 0.49
CAPN9O14815 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CAPN9O14815 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
CAPN9O14815 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CAPN9O14815 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CAPN9O14815 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
CAPN9O14815 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.08■□□□□ 0.49
CAPN9O14815 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CAPN9O14815 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CAPN9O14815 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CAPN9O14815 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CAPN9O14815 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CAPN9O14815 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
CAPN9O14815 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.08■□□□□ 0.48
CAPN9O14815 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CAPN9O14815 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CAPN9O14815 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.08■□□□□ 0.48
CAPN9O14815 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CAPN9O14815 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CAPN9O14815 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CAPN9O14815 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.08■□□□□ 0.48
CAPN9O14815 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CAPN9O14815 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.08■□□□□ 0.48
CAPN9O14815 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CAPN9O14815 AL031284.1-201ENST00000419297 478 ntBASIC18.08■□□□□ 0.48
CAPN9O14815 HNRNPDP1-201ENST00000439535 754 ntBASIC18.08■□□□□ 0.48
CAPN9O14815 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.08■□□□□ 0.48
CAPN9O14815 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CAPN9O14815 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.08■□□□□ 0.48
CAPN9O14815 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.08■□□□□ 0.48
CAPN9O14815 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.08■□□□□ 0.48
CAPN9O14815 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.08■□□□□ 0.48
CAPN9O14815 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms