Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 RAB35-202ENST00000534951 939 ntTSL 2 BASIC23.39■■□□□ 1.33
CHD2O14647 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC23.39■■□□□ 1.33
CHD2O14647 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC23.39■■□□□ 1.33
CHD2O14647 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
CHD2O14647 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC23.39■■□□□ 1.33
CHD2O14647 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CHD2O14647 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
CHD2O14647 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
CHD2O14647 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CHD2O14647 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
CHD2O14647 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC23.38■■□□□ 1.33
CHD2O14647 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CHD2O14647 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC23.38■■□□□ 1.33
CHD2O14647 AC087499.6-201ENST00000411576 835 ntBASIC23.38■■□□□ 1.33
CHD2O14647 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CHD2O14647 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
CHD2O14647 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC23.38■■□□□ 1.33
CHD2O14647 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC23.38■■□□□ 1.33
CHD2O14647 AC044860.1-202ENST00000559481 777 ntBASIC23.38■■□□□ 1.33
CHD2O14647 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC23.38■■□□□ 1.33
CHD2O14647 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CHD2O14647 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC23.38■■□□□ 1.33
CHD2O14647 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CHD2O14647 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CHD2O14647 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC23.38■■□□□ 1.33
CHD2O14647 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CHD2O14647 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CHD2O14647 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CHD2O14647 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC23.38■■□□□ 1.33
CHD2O14647 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC23.38■■□□□ 1.33
CHD2O14647 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
CHD2O14647 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC23.38■■□□□ 1.33
CHD2O14647 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CHD2O14647 GOLGA2P9-201ENST00000596977 1937 ntBASIC23.38■■□□□ 1.33
CHD2O14647 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC23.38■■□□□ 1.33
CHD2O14647 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CHD2O14647 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CHD2O14647 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC23.38■■□□□ 1.33
CHD2O14647 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
CHD2O14647 AC098850.1-201ENST00000419919 790 ntBASIC23.38■■□□□ 1.33
CHD2O14647 RN7SL618P-201ENST00000477850 296 ntBASIC23.38■■□□□ 1.33
CHD2O14647 AC011495.1-201ENST00000498085 584 ntBASIC23.38■■□□□ 1.33
CHD2O14647 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC23.38■■□□□ 1.33
CHD2O14647 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC23.38■■□□□ 1.33
CHD2O14647 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
CHD2O14647 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CHD2O14647 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC23.37■■□□□ 1.33
CHD2O14647 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
CHD2O14647 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CHD2O14647 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC23.37■■□□□ 1.33
CHD2O14647 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CHD2O14647 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
CHD2O14647 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
CHD2O14647 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CHD2O14647 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CHD2O14647 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC23.37■■□□□ 1.33
CHD2O14647 OSM-203ENST00000403463 464 ntTSL 3 BASIC23.37■■□□□ 1.33
CHD2O14647 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
CHD2O14647 CD81-207ENST00000481687 890 ntTSL 2 BASIC23.37■■□□□ 1.33
CHD2O14647 USP32P1-208ENST00000506594 1164 ntBASIC23.37■■□□□ 1.33
CHD2O14647 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC23.37■■□□□ 1.33
CHD2O14647 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC23.37■■□□□ 1.33
CHD2O14647 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC23.37■■□□□ 1.33
CHD2O14647 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CHD2O14647 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC23.37■■□□□ 1.33
CHD2O14647 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CHD2O14647 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CHD2O14647 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC23.37■■□□□ 1.33
CHD2O14647 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CHD2O14647 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC23.36■■□□□ 1.33
CHD2O14647 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC23.36■■□□□ 1.33
CHD2O14647 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHD2O14647 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC23.36■■□□□ 1.33
CHD2O14647 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC23.36■■□□□ 1.33
CHD2O14647 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CHD2O14647 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHD2O14647 AC234783.1-201ENST00000441761 496 ntBASIC23.36■■□□□ 1.33
CHD2O14647 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHD2O14647 ORC6-206ENST00000568364 888 ntTSL 5 BASIC23.36■■□□□ 1.33
CHD2O14647 AL512343.1-201ENST00000605837 169 ntBASIC23.36■■□□□ 1.33
CHD2O14647 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC23.36■■□□□ 1.33
CHD2O14647 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
CHD2O14647 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC23.36■■□□□ 1.33
CHD2O14647 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC23.36■■□□□ 1.33
CHD2O14647 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC23.36■■□□□ 1.33
CHD2O14647 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC23.36■■□□□ 1.33
CHD2O14647 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHD2O14647 RPS19-201ENST00000221975 500 ntTSL 3 BASIC23.36■■□□□ 1.33
CHD2O14647 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC23.36■■□□□ 1.33
CHD2O14647 AC007389.4-201ENST00000454674 793 ntBASIC23.36■■□□□ 1.33
CHD2O14647 DOC2GP-202ENST00000514950 1163 ntBASIC23.36■■□□□ 1.33
CHD2O14647 PACS1-203ENST00000524815 628 ntTSL 4 BASIC23.36■■□□□ 1.33
CHD2O14647 AC023310.3-201ENST00000557027 670 ntBASIC23.36■■□□□ 1.33
CHD2O14647 AC100756.1-201ENST00000562736 682 ntBASIC23.36■■□□□ 1.33
CHD2O14647 AC138749.3-201ENST00000567691 622 ntBASIC23.36■■□□□ 1.33
CHD2O14647 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
CHD2O14647 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC23.36■■□□□ 1.33
CHD2O14647 AC116165.1-201ENST00000611806 668 ntBASIC23.36■■□□□ 1.33
CHD2O14647 5S_rRNA.22-201ENST00000614916 106 ntBASIC23.36■■□□□ 1.33
CHD2O14647 COX11-210ENST00000639671 696 ntBASIC23.36■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms