Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN4O14493 LINC02012-201ENST00000608206 1725 ntBASIC16.13■□□□□ 0.17
CLDN4O14493 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN4O14493 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.13■□□□□ 0.17
CLDN4O14493 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN4O14493 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN4O14493 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN4O14493 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN4O14493 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN4O14493 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CLDN4O14493 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN4O14493 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN4O14493 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CLDN4O14493 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN4O14493 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CLDN4O14493 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN4O14493 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CLDN4O14493 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.12■□□□□ 0.17
CLDN4O14493 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.12■□□□□ 0.17
CLDN4O14493 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CLDN4O14493 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CLDN4O14493 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CLDN4O14493 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CLDN4O14493 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN4O14493 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.12■□□□□ 0.17
CLDN4O14493 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CLDN4O14493 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.12■□□□□ 0.17
CLDN4O14493 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.12■□□□□ 0.17
CLDN4O14493 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.12■□□□□ 0.17
CLDN4O14493 BX640515.1-201ENST00000617215 977 ntBASIC16.12■□□□□ 0.17
CLDN4O14493 AC117500.6-201ENST00000624871 588 ntBASIC16.12■□□□□ 0.17
CLDN4O14493 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN4O14493 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN4O14493 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
CLDN4O14493 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN4O14493 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN4O14493 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.12■□□□□ 0.17
CLDN4O14493 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
CLDN4O14493 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.12■□□□□ 0.17
CLDN4O14493 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN4O14493 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CLDN4O14493 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN4O14493 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.12■□□□□ 0.17
CLDN4O14493 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.12■□□□□ 0.17
CLDN4O14493 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN4O14493 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
CLDN4O14493 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN4O14493 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN4O14493 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN4O14493 AC243591.1-201ENST00000452967 1364 ntBASIC16.12■□□□□ 0.17
CLDN4O14493 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN4O14493 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN4O14493 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN4O14493 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN4O14493 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN4O14493 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN4O14493 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.11■□□□□ 0.17
CLDN4O14493 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN4O14493 AC106820.2-201ENST00000563775 3264 ntBASIC16.11■□□□□ 0.17
CLDN4O14493 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN4O14493 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN4O14493 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN4O14493 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN4O14493 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN4O14493 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.11■□□□□ 0.17
CLDN4O14493 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CLDN4O14493 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN4O14493 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN4O14493 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.11■□□□□ 0.17
CLDN4O14493 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.11■□□□□ 0.17
CLDN4O14493 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN4O14493 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.11■□□□□ 0.17
CLDN4O14493 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.11■□□□□ 0.17
CLDN4O14493 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.11■□□□□ 0.17
CLDN4O14493 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN4O14493 TERC-201ENST00000602385 541 ntBASIC16.11■□□□□ 0.17
CLDN4O14493 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CLDN4O14493 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN4O14493 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.11■□□□□ 0.17
CLDN4O14493 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN4O14493 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.11■□□□□ 0.17
CLDN4O14493 IL9RP2-201ENST00000423948 1312 ntBASIC16.11■□□□□ 0.17
CLDN4O14493 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CLDN4O14493 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CLDN4O14493 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN4O14493 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN4O14493 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN4O14493 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CLDN4O14493 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CLDN4O14493 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN4O14493 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN4O14493 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CLDN4O14493 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN4O14493 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN4O14493 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN4O14493 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN4O14493 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN4O14493 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN4O14493 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN4O14493 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms