Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
O00370 AC106886.4-201ENST00000623557 2502 ntBASIC18.25■□□□□ 0.51
O00370 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.25■□□□□ 0.51
O00370 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
O00370 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
O00370 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
O00370 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.25■□□□□ 0.51
O00370 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
O00370 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
O00370 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.25■□□□□ 0.51
O00370 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.25■□□□□ 0.51
O00370 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
O00370 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
O00370 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.25■□□□□ 0.51
O00370 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.25■□□□□ 0.51
O00370 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.25■□□□□ 0.51
O00370 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.25■□□□□ 0.51
O00370 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.25■□□□□ 0.51
O00370 AC012640.2-201ENST00000561606 901 ntBASIC18.25■□□□□ 0.51
O00370 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.25■□□□□ 0.51
O00370 MIR7706-201ENST00000613747 67 ntBASIC18.25■□□□□ 0.51
O00370 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.25■□□□□ 0.51
O00370 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
O00370 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
O00370 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
O00370 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
O00370 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
O00370 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
O00370 AC006504.4-201ENST00000592118 1568 ntBASIC18.25■□□□□ 0.51
O00370 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
O00370 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
O00370 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
O00370 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
O00370 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
O00370 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
O00370 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
O00370 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
O00370 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
O00370 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
O00370 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.24■□□□□ 0.51
O00370 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
O00370 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
O00370 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
O00370 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
O00370 AC073621.1-201ENST00000392730 636 ntBASIC18.24■□□□□ 0.51
O00370 AL031284.1-201ENST00000419297 478 ntBASIC18.24■□□□□ 0.51
O00370 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.24■□□□□ 0.51
O00370 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
O00370 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.24■□□□□ 0.51
O00370 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.24■□□□□ 0.51
O00370 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.24■□□□□ 0.51
O00370 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
O00370 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.24■□□□□ 0.51
O00370 AL049840.3-201ENST00000602669 611 ntBASIC18.24■□□□□ 0.51
O00370 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
O00370 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
O00370 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
O00370 GPR89P-201ENST00000407924 1495 ntBASIC18.24■□□□□ 0.51
O00370 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
O00370 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
O00370 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
O00370 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
O00370 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
O00370 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
O00370 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
O00370 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
O00370 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
O00370 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.23■□□□□ 0.51
O00370 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
O00370 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.23■□□□□ 0.51
O00370 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
O00370 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.23■□□□□ 0.51
O00370 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
O00370 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
O00370 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
O00370 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
O00370 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
O00370 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
O00370 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
O00370 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
O00370 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.23■□□□□ 0.51
O00370 AL662844.1-201ENST00000546340 181 ntBASIC18.23■□□□□ 0.51
O00370 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.23■□□□□ 0.51
O00370 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.23■□□□□ 0.51
O00370 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.23■□□□□ 0.51
O00370 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.23■□□□□ 0.51
O00370 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.23■□□□□ 0.51
O00370 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
O00370 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
O00370 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
O00370 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
O00370 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
O00370 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.23■□□□□ 0.51
O00370 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.23■□□□□ 0.51
O00370 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
O00370 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.23■□□□□ 0.51
O00370 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
O00370 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.22■□□□□ 0.51
O00370 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
O00370 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms