Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLIC1O00299 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.16■□□□□ 0.18
CLIC1O00299 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.16■□□□□ 0.18
CLIC1O00299 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.16■□□□□ 0.18
CLIC1O00299 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.16■□□□□ 0.18
CLIC1O00299 BX276092.5-203ENST00000456199 560 ntBASIC16.16■□□□□ 0.18
CLIC1O00299 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.16■□□□□ 0.18
CLIC1O00299 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.16■□□□□ 0.18
CLIC1O00299 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.16■□□□□ 0.18
CLIC1O00299 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.16■□□□□ 0.18
CLIC1O00299 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.16■□□□□ 0.18
CLIC1O00299 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLIC1O00299 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLIC1O00299 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLIC1O00299 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.16■□□□□ 0.18
CLIC1O00299 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLIC1O00299 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLIC1O00299 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CLIC1O00299 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLIC1O00299 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLIC1O00299 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
CLIC1O00299 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLIC1O00299 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CLIC1O00299 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.15■□□□□ 0.18
CLIC1O00299 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
CLIC1O00299 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLIC1O00299 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.15■□□□□ 0.18
CLIC1O00299 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLIC1O00299 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CLIC1O00299 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLIC1O00299 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
CLIC1O00299 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLIC1O00299 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.15■□□□□ 0.18
CLIC1O00299 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLIC1O00299 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.15■□□□□ 0.18
CLIC1O00299 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLIC1O00299 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLIC1O00299 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLIC1O00299 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.15■□□□□ 0.18
CLIC1O00299 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLIC1O00299 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.15■□□□□ 0.18
CLIC1O00299 CHCHD2P8-201ENST00000429873 447 ntBASIC16.15■□□□□ 0.18
CLIC1O00299 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLIC1O00299 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CLIC1O00299 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.15■□□□□ 0.18
CLIC1O00299 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.15■□□□□ 0.18
CLIC1O00299 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.15■□□□□ 0.18
CLIC1O00299 AP005901.3-202ENST00000581653 237 ntBASIC16.15■□□□□ 0.18
CLIC1O00299 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
CLIC1O00299 NTF6B-201ENST00000591913 560 ntBASIC16.15■□□□□ 0.18
CLIC1O00299 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CLIC1O00299 AL121672.3-201ENST00000608644 468 ntBASIC16.15■□□□□ 0.18
CLIC1O00299 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CLIC1O00299 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.15■□□□□ 0.18
CLIC1O00299 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CLIC1O00299 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLIC1O00299 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CLIC1O00299 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLIC1O00299 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
CLIC1O00299 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLIC1O00299 TP73-AS1-210ENST00000637775 1455 ntBASIC16.15■□□□□ 0.18
CLIC1O00299 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLIC1O00299 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLIC1O00299 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.15■□□□□ 0.18
CLIC1O00299 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLIC1O00299 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CLIC1O00299 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLIC1O00299 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.15■□□□□ 0.18
CLIC1O00299 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLIC1O00299 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.15■□□□□ 0.18
CLIC1O00299 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.15■□□□□ 0.18
CLIC1O00299 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLIC1O00299 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.14■□□□□ 0.18
CLIC1O00299 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.14■□□□□ 0.18
CLIC1O00299 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CLIC1O00299 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CLIC1O00299 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CLIC1O00299 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
CLIC1O00299 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLIC1O00299 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLIC1O00299 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLIC1O00299 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLIC1O00299 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.14■□□□□ 0.17
CLIC1O00299 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.14■□□□□ 0.17
CLIC1O00299 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLIC1O00299 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLIC1O00299 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLIC1O00299 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLIC1O00299 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLIC1O00299 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLIC1O00299 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CLIC1O00299 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLIC1O00299 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.14■□□□□ 0.17
CLIC1O00299 RCN1P1-201ENST00000400413 996 ntBASIC16.14■□□□□ 0.17
CLIC1O00299 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.14■□□□□ 0.17
CLIC1O00299 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CLIC1O00299 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLIC1O00299 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLIC1O00299 AP002490.2-201ENST00000524791 560 ntBASIC16.14■□□□□ 0.17
CLIC1O00299 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms