Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 RPL13AP23-201ENST00000480739 586 ntBASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 IGHV3-22-201ENST00000520721 359 ntBASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 AC124947.2-201ENST00000547118 1133 ntBASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 AC106730.1-201ENST00000566722 1090 ntBASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 AC006557.2-201ENST00000592985 1240 ntBASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 AC008735.5-201ENST00000623544 497 ntBASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.58■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.58■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.58■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.58■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.58■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.58■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.58■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.58■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.58■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.57■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.57■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.57■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms