Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 KRT8P10-201ENST00000450021 1447 ntBASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 AC063952.2-201ENST00000498792 1227 ntBASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 AC090616.6-201ENST00000582640 721 ntBASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 AC124864.1-201ENST00000623408 392 ntBASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-7A0A0A0MS04 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-7A0A0A0MS04 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-7A0A0A0MS04 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-7A0A0A0MS04 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-7A0A0A0MS04 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-7A0A0A0MS04 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-7A0A0A0MS04 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-7A0A0A0MS04 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRBV6-7A0A0A0MS04 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-7A0A0A0MS04 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-7A0A0A0MS04 AL353593.2-201ENST00000602529 1483 ntBASIC14.34□□□□□ -0.11
TRBV6-7A0A0A0MS04 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TRBV6-7A0A0A0MS04 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TRBV6-7A0A0A0MS04 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-7A0A0A0MS04 AL845331.1-201ENST00000424978 1190 ntBASIC14.34□□□□□ -0.11
TRBV6-7A0A0A0MS04 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-7A0A0A0MS04 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-7A0A0A0MS04 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC14.34□□□□□ -0.11
TRBV6-7A0A0A0MS04 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-7A0A0A0MS04 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.34□□□□□ -0.11
TRBV6-7A0A0A0MS04 AC011840.4-201ENST00000578471 627 ntBASIC14.34□□□□□ -0.11
TRBV6-7A0A0A0MS04 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC14.34□□□□□ -0.11
TRBV6-7A0A0A0MS04 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC14.34□□□□□ -0.11
TRBV6-7A0A0A0MS04 RBM42-202ENST00000586618 771 ntTSL 3 BASIC14.34□□□□□ -0.11
TRBV6-7A0A0A0MS04 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC14.34□□□□□ -0.11
TRBV6-7A0A0A0MS04 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.34□□□□□ -0.11
TRBV6-7A0A0A0MS04 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TRBV6-7A0A0A0MS04 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-7A0A0A0MS04 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.34□□□□□ -0.11
TRBV6-7A0A0A0MS04 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-7A0A0A0MS04 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.34□□□□□ -0.11
TRBV6-7A0A0A0MS04 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-7A0A0A0MS04 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-7A0A0A0MS04 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-7A0A0A0MS04 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-7A0A0A0MS04 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-7A0A0A0MS04 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-7A0A0A0MS04 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.34□□□□□ -0.11
TRBV6-7A0A0A0MS04 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-7A0A0A0MS04 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.34□□□□□ -0.11
TRBV6-7A0A0A0MS04 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-7A0A0A0MS04 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-7A0A0A0MS04 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-7A0A0A0MS04 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRBV6-7A0A0A0MS04 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
TRBV6-7A0A0A0MS04 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.33□□□□□ -0.11
TRBV6-7A0A0A0MS04 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRBV6-7A0A0A0MS04 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRBV6-7A0A0A0MS04 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
TRBV6-7A0A0A0MS04 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRBV6-7A0A0A0MS04 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRBV6-7A0A0A0MS04 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-7A0A0A0MS04 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-7A0A0A0MS04 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.33□□□□□ -0.12
TRBV6-7A0A0A0MS04 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms