Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.46□□□□□ -0.41
TRGV1A0A0A0MS02 AD000864.1-201ENST00000624076 2295 ntBASIC12.46□□□□□ -0.41
TRGV1A0A0A0MS02 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TRGV1A0A0A0MS02 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRGV1A0A0A0MS02 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRGV1A0A0A0MS02 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRGV1A0A0A0MS02 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
TRGV1A0A0A0MS02 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRGV1A0A0A0MS02 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TRGV1A0A0A0MS02 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRGV1A0A0A0MS02 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRGV1A0A0A0MS02 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRGV1A0A0A0MS02 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRGV1A0A0A0MS02 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRGV1A0A0A0MS02 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRGV1A0A0A0MS02 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC12.46□□□□□ -0.41
TRGV1A0A0A0MS02 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC12.46□□□□□ -0.41
TRGV1A0A0A0MS02 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRGV1A0A0A0MS02 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRGV1A0A0A0MS02 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TRGV1A0A0A0MS02 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC12.46□□□□□ -0.41
TRGV1A0A0A0MS02 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TRGV1A0A0A0MS02 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TRGV1A0A0A0MS02 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC12.46□□□□□ -0.41
TRGV1A0A0A0MS02 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC12.46□□□□□ -0.41
TRGV1A0A0A0MS02 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
TRGV1A0A0A0MS02 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TRGV1A0A0A0MS02 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC12.46□□□□□ -0.41
TRGV1A0A0A0MS02 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC12.46□□□□□ -0.41
TRGV1A0A0A0MS02 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC12.46□□□□□ -0.41
TRGV1A0A0A0MS02 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TRGV1A0A0A0MS02 AL591684.3-201ENST00000605187 298 ntBASIC12.46□□□□□ -0.41
TRGV1A0A0A0MS02 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC12.46□□□□□ -0.41
TRGV1A0A0A0MS02 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRGV1A0A0A0MS02 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.46□□□□□ -0.41
TRGV1A0A0A0MS02 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TRGV1A0A0A0MS02 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC12.46□□□□□ -0.42
TRGV1A0A0A0MS02 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC12.46□□□□□ -0.42
TRGV1A0A0A0MS02 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TRGV1A0A0A0MS02 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
TRGV1A0A0A0MS02 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
TRGV1A0A0A0MS02 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC12.46□□□□□ -0.42
TRGV1A0A0A0MS02 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
TRGV1A0A0A0MS02 AC132938.5-201ENST00000624980 1813 ntBASIC12.46□□□□□ -0.42
TRGV1A0A0A0MS02 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
TRGV1A0A0A0MS02 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
TRGV1A0A0A0MS02 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
TRGV1A0A0A0MS02 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
TRGV1A0A0A0MS02 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 PCDHA12-202ENST00000613593 2588 ntBASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 BET1L-206ENST00000486280 665 ntTSL 3 BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 MIR3652-201ENST00000579335 131 ntBASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 AD001527.2-201ENST00000622994 785 ntBASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 CCNC-219ENST00000627680 896 ntTSL 5 BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms