Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV18A0A075B6X5 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.77□□□□□ -0.04
TRAV18A0A075B6X5 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
TRAV18A0A075B6X5 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV18A0A075B6X5 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
TRAV18A0A075B6X5 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV18A0A075B6X5 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.77□□□□□ -0.04
TRAV18A0A075B6X5 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.77□□□□□ -0.04
TRAV18A0A075B6X5 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV18A0A075B6X5 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV18A0A075B6X5 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV18A0A075B6X5 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
TRAV18A0A075B6X5 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV18A0A075B6X5 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV18A0A075B6X5 PRORSD1P-201ENST00000295112 541 ntBASIC14.77□□□□□ -0.05
TRAV18A0A075B6X5 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV18A0A075B6X5 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV18A0A075B6X5 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.77□□□□□ -0.05
TRAV18A0A075B6X5 MTCL1P1-201ENST00000446207 792 ntBASIC14.77□□□□□ -0.05
TRAV18A0A075B6X5 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC14.77□□□□□ -0.05
TRAV18A0A075B6X5 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC14.77□□□□□ -0.05
TRAV18A0A075B6X5 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV18A0A075B6X5 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV18A0A075B6X5 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC14.77□□□□□ -0.05
TRAV18A0A075B6X5 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC14.77□□□□□ -0.05
TRAV18A0A075B6X5 Z99916.2-201ENST00000604037 246 ntBASIC14.77□□□□□ -0.05
TRAV18A0A075B6X5 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.77□□□□□ -0.05
TRAV18A0A075B6X5 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.77□□□□□ -0.05
TRAV18A0A075B6X5 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV18A0A075B6X5 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV18A0A075B6X5 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV18A0A075B6X5 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAV18A0A075B6X5 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV18A0A075B6X5 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV18A0A075B6X5 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
TRAV18A0A075B6X5 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
TRAV18A0A075B6X5 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV18A0A075B6X5 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV18A0A075B6X5 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
TRAV18A0A075B6X5 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
TRAV18A0A075B6X5 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.76□□□□□ -0.05
TRAV18A0A075B6X5 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV18A0A075B6X5 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
TRAV18A0A075B6X5 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV18A0A075B6X5 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV18A0A075B6X5 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TRAV18A0A075B6X5 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV18A0A075B6X5 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV18A0A075B6X5 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV18A0A075B6X5 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV18A0A075B6X5 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.76□□□□□ -0.05
TRAV18A0A075B6X5 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV18A0A075B6X5 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV18A0A075B6X5 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV18A0A075B6X5 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV18A0A075B6X5 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV18A0A075B6X5 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV18A0A075B6X5 COX5BP2-201ENST00000392354 334 ntBASIC14.76□□□□□ -0.05
TRAV18A0A075B6X5 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV18A0A075B6X5 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC14.76□□□□□ -0.05
TRAV18A0A075B6X5 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV18A0A075B6X5 CNP-204ENST00000472031 1019 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV18A0A075B6X5 IGHV3-52-201ENST00000519770 353 ntBASIC14.76□□□□□ -0.05
TRAV18A0A075B6X5 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
TRAV18A0A075B6X5 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAV18A0A075B6X5 MIR4785-201ENST00000585005 73 ntBASIC14.76□□□□□ -0.05
TRAV18A0A075B6X5 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV18A0A075B6X5 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV18A0A075B6X5 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
TRAV18A0A075B6X5 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV18A0A075B6X5 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TRAV18A0A075B6X5 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV18A0A075B6X5 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
TRAV18A0A075B6X5 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV18A0A075B6X5 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
TRAV18A0A075B6X5 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV18A0A075B6X5 AL391807.1-203ENST00000604392 2365 ntBASIC14.76□□□□□ -0.05
TRAV18A0A075B6X5 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV18A0A075B6X5 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TRAV18A0A075B6X5 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV18A0A075B6X5 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAV18A0A075B6X5 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV18A0A075B6X5 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAV18A0A075B6X5 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TRAV18A0A075B6X5 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms