Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.63■□□□□ 0.89
ARFGEF1Q9Y6D6 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ARFGEF1Q9Y6D6 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.62■□□□□ 0.89
ARFGEF1Q9Y6D6 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARFGEF1Q9Y6D6 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC20.62■□□□□ 0.89
ARFGEF1Q9Y6D6 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARFGEF1Q9Y6D6 MTND6P24-201ENST00000440466 518 ntBASIC20.62■□□□□ 0.89
ARFGEF1Q9Y6D6 AC093004.1-201ENST00000508850 424 ntBASIC20.62■□□□□ 0.89
ARFGEF1Q9Y6D6 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC20.62■□□□□ 0.89
ARFGEF1Q9Y6D6 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC20.62■□□□□ 0.89
ARFGEF1Q9Y6D6 MIR4259-201ENST00000584466 101 ntBASIC20.62■□□□□ 0.89
ARFGEF1Q9Y6D6 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
ARFGEF1Q9Y6D6 AL139327.4-201ENST00000612362 153 ntBASIC20.62■□□□□ 0.89
ARFGEF1Q9Y6D6 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
ARFGEF1Q9Y6D6 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARFGEF1Q9Y6D6 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC20.62■□□□□ 0.89
ARFGEF1Q9Y6D6 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ARFGEF1Q9Y6D6 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARFGEF1Q9Y6D6 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.62■□□□□ 0.89
ARFGEF1Q9Y6D6 AL035456.1-201ENST00000456064 1369 ntBASIC20.62■□□□□ 0.89
ARFGEF1Q9Y6D6 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARFGEF1Q9Y6D6 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.62■□□□□ 0.89
ARFGEF1Q9Y6D6 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARFGEF1Q9Y6D6 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARFGEF1Q9Y6D6 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARFGEF1Q9Y6D6 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARFGEF1Q9Y6D6 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC20.62■□□□□ 0.89
ARFGEF1Q9Y6D6 RPL37AP1-201ENST00000412502 279 ntBASIC20.62■□□□□ 0.89
ARFGEF1Q9Y6D6 PRYP6-201ENST00000514804 343 ntBASIC20.62■□□□□ 0.89
ARFGEF1Q9Y6D6 AC055876.2-201ENST00000531834 546 ntBASIC20.62■□□□□ 0.89
ARFGEF1Q9Y6D6 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC20.62■□□□□ 0.89
ARFGEF1Q9Y6D6 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC20.62■□□□□ 0.89
ARFGEF1Q9Y6D6 AC008735.3-201ENST00000596646 500 ntBASIC20.62■□□□□ 0.89
ARFGEF1Q9Y6D6 AL133215.2-201ENST00000609242 977 ntBASIC20.62■□□□□ 0.89
ARFGEF1Q9Y6D6 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
ARFGEF1Q9Y6D6 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARFGEF1Q9Y6D6 AL133338.1-201ENST00000565695 1517 ntBASIC20.61■□□□□ 0.89
ARFGEF1Q9Y6D6 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARFGEF1Q9Y6D6 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC20.61■□□□□ 0.89
ARFGEF1Q9Y6D6 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ARFGEF1Q9Y6D6 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARFGEF1Q9Y6D6 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
ARFGEF1Q9Y6D6 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARFGEF1Q9Y6D6 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC20.61■□□□□ 0.89
ARFGEF1Q9Y6D6 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC20.61■□□□□ 0.89
ARFGEF1Q9Y6D6 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC20.61■□□□□ 0.89
ARFGEF1Q9Y6D6 AC022210.1-201ENST00000449856 793 ntBASIC20.61■□□□□ 0.89
ARFGEF1Q9Y6D6 GLI4-203ENST00000517468 963 ntTSL 5 BASIC20.61■□□□□ 0.89
ARFGEF1Q9Y6D6 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC20.61■□□□□ 0.89
ARFGEF1Q9Y6D6 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC20.61■□□□□ 0.89
ARFGEF1Q9Y6D6 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC20.61■□□□□ 0.89
ARFGEF1Q9Y6D6 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARFGEF1Q9Y6D6 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARFGEF1Q9Y6D6 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARFGEF1Q9Y6D6 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
ARFGEF1Q9Y6D6 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARFGEF1Q9Y6D6 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.61■□□□□ 0.89
ARFGEF1Q9Y6D6 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARFGEF1Q9Y6D6 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
ARFGEF1Q9Y6D6 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARFGEF1Q9Y6D6 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARFGEF1Q9Y6D6 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
ARFGEF1Q9Y6D6 AC092552.1-201ENST00000547243 906 ntBASIC20.6■□□□□ 0.89
ARFGEF1Q9Y6D6 AL512361.1-201ENST00000554200 418 ntBASIC20.6■□□□□ 0.89
ARFGEF1Q9Y6D6 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC20.6■□□□□ 0.89
ARFGEF1Q9Y6D6 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ARFGEF1Q9Y6D6 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
ARFGEF1Q9Y6D6 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARFGEF1Q9Y6D6 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARFGEF1Q9Y6D6 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARFGEF1Q9Y6D6 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARFGEF1Q9Y6D6 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC20.6■□□□□ 0.89
ARFGEF1Q9Y6D6 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARFGEF1Q9Y6D6 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.6■□□□□ 0.89
ARFGEF1Q9Y6D6 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.6■□□□□ 0.89
ARFGEF1Q9Y6D6 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC20.6■□□□□ 0.89
ARFGEF1Q9Y6D6 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARFGEF1Q9Y6D6 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARFGEF1Q9Y6D6 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ARFGEF1Q9Y6D6 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ARFGEF1Q9Y6D6 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC20.6■□□□□ 0.89
ARFGEF1Q9Y6D6 FAM8A2P-201ENST00000528813 1142 ntBASIC20.6■□□□□ 0.89
ARFGEF1Q9Y6D6 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC20.6■□□□□ 0.89
ARFGEF1Q9Y6D6 LITAF-210ENST00000571976 548 ntTSL 2 BASIC20.6■□□□□ 0.89
ARFGEF1Q9Y6D6 LITAF-214ENST00000574703 486 ntTSL 2 BASIC20.6■□□□□ 0.89
ARFGEF1Q9Y6D6 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.6■□□□□ 0.89
ARFGEF1Q9Y6D6 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARFGEF1Q9Y6D6 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ARFGEF1Q9Y6D6 REXO1L6P-201ENST00000603433 1515 ntBASIC20.6■□□□□ 0.89
ARFGEF1Q9Y6D6 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.6■□□□□ 0.89
ARFGEF1Q9Y6D6 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARFGEF1Q9Y6D6 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC20.59■□□□□ 0.89
ARFGEF1Q9Y6D6 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC20.59■□□□□ 0.89
ARFGEF1Q9Y6D6 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.59■□□□□ 0.89
ARFGEF1Q9Y6D6 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ARFGEF1Q9Y6D6 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ARFGEF1Q9Y6D6 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARFGEF1Q9Y6D6 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.59■□□□□ 0.89
ARFGEF1Q9Y6D6 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.59■□□□□ 0.89
ARFGEF1Q9Y6D6 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms