Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.77■□□□□ 0.43
HCFC2Q9Y5Z7 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
HCFC2Q9Y5Z7 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
HCFC2Q9Y5Z7 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HCFC2Q9Y5Z7 SLC22A20-204ENST00000530038 1673 ntBASIC17.77■□□□□ 0.43
HCFC2Q9Y5Z7 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
HCFC2Q9Y5Z7 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
HCFC2Q9Y5Z7 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.77■□□□□ 0.43
HCFC2Q9Y5Z7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HCFC2Q9Y5Z7 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
HCFC2Q9Y5Z7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HCFC2Q9Y5Z7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.76■□□□□ 0.43
HCFC2Q9Y5Z7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HCFC2Q9Y5Z7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
HCFC2Q9Y5Z7 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.76■□□□□ 0.43
HCFC2Q9Y5Z7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HCFC2Q9Y5Z7 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.76■□□□□ 0.43
HCFC2Q9Y5Z7 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HCFC2Q9Y5Z7 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.76■□□□□ 0.43
HCFC2Q9Y5Z7 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.76■□□□□ 0.43
HCFC2Q9Y5Z7 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
HCFC2Q9Y5Z7 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.76■□□□□ 0.43
HCFC2Q9Y5Z7 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.76■□□□□ 0.43
HCFC2Q9Y5Z7 SERBP1P5-201ENST00000510079 1181 ntBASIC17.76■□□□□ 0.43
HCFC2Q9Y5Z7 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.76■□□□□ 0.43
HCFC2Q9Y5Z7 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.76■□□□□ 0.43
HCFC2Q9Y5Z7 MIR3909-201ENST00000579518 119 ntBASIC17.76■□□□□ 0.43
HCFC2Q9Y5Z7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HCFC2Q9Y5Z7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HCFC2Q9Y5Z7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
HCFC2Q9Y5Z7 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.76■□□□□ 0.43
HCFC2Q9Y5Z7 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HCFC2Q9Y5Z7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.76■□□□□ 0.43
HCFC2Q9Y5Z7 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HCFC2Q9Y5Z7 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.76■□□□□ 0.43
HCFC2Q9Y5Z7 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
HCFC2Q9Y5Z7 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HCFC2Q9Y5Z7 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
HCFC2Q9Y5Z7 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HCFC2Q9Y5Z7 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HCFC2Q9Y5Z7 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.75■□□□□ 0.43
HCFC2Q9Y5Z7 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
HCFC2Q9Y5Z7 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
HCFC2Q9Y5Z7 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HCFC2Q9Y5Z7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.75■□□□□ 0.43
HCFC2Q9Y5Z7 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.75■□□□□ 0.43
HCFC2Q9Y5Z7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
HCFC2Q9Y5Z7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HCFC2Q9Y5Z7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HCFC2Q9Y5Z7 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
HCFC2Q9Y5Z7 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HCFC2Q9Y5Z7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HCFC2Q9Y5Z7 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.75■□□□□ 0.43
HCFC2Q9Y5Z7 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HCFC2Q9Y5Z7 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HCFC2Q9Y5Z7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.75■□□□□ 0.43
HCFC2Q9Y5Z7 AC016027.1-202ENST00000607927 1699 ntBASIC17.75■□□□□ 0.43
HCFC2Q9Y5Z7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
HCFC2Q9Y5Z7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HCFC2Q9Y5Z7 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
HCFC2Q9Y5Z7 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.75■□□□□ 0.43
HCFC2Q9Y5Z7 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.75■□□□□ 0.43
HCFC2Q9Y5Z7 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.75■□□□□ 0.43
HCFC2Q9Y5Z7 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.75■□□□□ 0.43
HCFC2Q9Y5Z7 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.75■□□□□ 0.43
HCFC2Q9Y5Z7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HCFC2Q9Y5Z7 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HCFC2Q9Y5Z7 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
HCFC2Q9Y5Z7 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HCFC2Q9Y5Z7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.74■□□□□ 0.43
HCFC2Q9Y5Z7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
HCFC2Q9Y5Z7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HCFC2Q9Y5Z7 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.74■□□□□ 0.43
HCFC2Q9Y5Z7 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HCFC2Q9Y5Z7 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.74■□□□□ 0.43
HCFC2Q9Y5Z7 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HCFC2Q9Y5Z7 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HCFC2Q9Y5Z7 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HCFC2Q9Y5Z7 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HCFC2Q9Y5Z7 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HCFC2Q9Y5Z7 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HCFC2Q9Y5Z7 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.74■□□□□ 0.43
HCFC2Q9Y5Z7 MRPS18AP1-201ENST00000414458 589 ntBASIC17.74■□□□□ 0.43
HCFC2Q9Y5Z7 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.74■□□□□ 0.43
HCFC2Q9Y5Z7 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.74■□□□□ 0.43
HCFC2Q9Y5Z7 AC091167.2-201ENST00000579581 588 ntBASIC17.74■□□□□ 0.43
HCFC2Q9Y5Z7 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.74■□□□□ 0.43
HCFC2Q9Y5Z7 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.74■□□□□ 0.43
HCFC2Q9Y5Z7 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.74■□□□□ 0.43
HCFC2Q9Y5Z7 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.74■□□□□ 0.43
HCFC2Q9Y5Z7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
HCFC2Q9Y5Z7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HCFC2Q9Y5Z7 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HCFC2Q9Y5Z7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
HCFC2Q9Y5Z7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.74■□□□□ 0.43
HCFC2Q9Y5Z7 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.74■□□□□ 0.43
HCFC2Q9Y5Z7 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
HCFC2Q9Y5Z7 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
HCFC2Q9Y5Z7 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.74■□□□□ 0.43
HCFC2Q9Y5Z7 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms