Protein–RNA interactions for Protein: Q9Y5G6

PCDHGA7, Protocadherin gamma-A7, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA7Q9Y5G6 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
PCDHGA7Q9Y5G6 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA7Q9Y5G6 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDHGA7Q9Y5G6 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA7Q9Y5G6 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA7Q9Y5G6 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDHGA7Q9Y5G6 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.01■□□□□ 0.31
PCDHGA7Q9Y5G6 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGA7Q9Y5G6 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
PCDHGA7Q9Y5G6 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDHGA7Q9Y5G6 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.01■□□□□ 0.31
PCDHGA7Q9Y5G6 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGA7Q9Y5G6 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.01■□□□□ 0.31
PCDHGA7Q9Y5G6 AC105339.3-201ENST00000560043 636 ntBASIC17.01■□□□□ 0.31
PCDHGA7Q9Y5G6 AC012640.2-201ENST00000561606 901 ntBASIC17.01■□□□□ 0.31
PCDHGA7Q9Y5G6 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGA7Q9Y5G6 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PCDHGA7Q9Y5G6 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.01■□□□□ 0.31
PCDHGA7Q9Y5G6 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA7Q9Y5G6 AC107918.4-202ENST00000641623 219 ntBASIC17.01■□□□□ 0.31
PCDHGA7Q9Y5G6 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA7Q9Y5G6 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA7Q9Y5G6 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
PCDHGA7Q9Y5G6 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDHGA7Q9Y5G6 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDHGA7Q9Y5G6 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PCDHGA7Q9Y5G6 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PCDHGA7Q9Y5G6 AC046158.3-201ENST00000624947 2558 ntBASIC17.01■□□□□ 0.31
PCDHGA7Q9Y5G6 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA7Q9Y5G6 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA7Q9Y5G6 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
PCDHGA7Q9Y5G6 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA7Q9Y5G6 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA7Q9Y5G6 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA7Q9Y5G6 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA7Q9Y5G6 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA7Q9Y5G6 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA7Q9Y5G6 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17■□□□□ 0.31
PCDHGA7Q9Y5G6 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
PCDHGA7Q9Y5G6 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA7Q9Y5G6 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA7Q9Y5G6 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA7Q9Y5G6 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA7Q9Y5G6 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA7Q9Y5G6 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA7Q9Y5G6 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17■□□□□ 0.31
PCDHGA7Q9Y5G6 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA7Q9Y5G6 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA7Q9Y5G6 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17■□□□□ 0.31
PCDHGA7Q9Y5G6 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA7Q9Y5G6 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PCDHGA7Q9Y5G6 RPSAP43-201ENST00000402237 625 ntBASIC17■□□□□ 0.31
PCDHGA7Q9Y5G6 HNRNPA1P28-201ENST00000424481 961 ntBASIC17■□□□□ 0.31
PCDHGA7Q9Y5G6 GPX1P2-201ENST00000429271 606 ntBASIC17■□□□□ 0.31
PCDHGA7Q9Y5G6 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA7Q9Y5G6 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17■□□□□ 0.31
PCDHGA7Q9Y5G6 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17■□□□□ 0.31
PCDHGA7Q9Y5G6 AC055717.3-201ENST00000622967 595 ntBASIC17■□□□□ 0.31
PCDHGA7Q9Y5G6 AC079781.4-201ENST00000641908 219 ntBASIC17■□□□□ 0.31
PCDHGA7Q9Y5G6 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17■□□□□ 0.31
PCDHGA7Q9Y5G6 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
PCDHGA7Q9Y5G6 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA7Q9Y5G6 AC009949.1-201ENST00000623048 1830 ntBASIC17■□□□□ 0.31
PCDHGA7Q9Y5G6 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17■□□□□ 0.31
PCDHGA7Q9Y5G6 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA7Q9Y5G6 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17■□□□□ 0.31
PCDHGA7Q9Y5G6 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA7Q9Y5G6 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA7Q9Y5G6 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA7Q9Y5G6 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA7Q9Y5G6 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHGA7Q9Y5G6 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.99■□□□□ 0.31
PCDHGA7Q9Y5G6 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA7Q9Y5G6 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHGA7Q9Y5G6 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA7Q9Y5G6 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA7Q9Y5G6 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA7Q9Y5G6 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
PCDHGA7Q9Y5G6 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PCDHGA7Q9Y5G6 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA7Q9Y5G6 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA7Q9Y5G6 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA7Q9Y5G6 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA7Q9Y5G6 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PCDHGA7Q9Y5G6 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA7Q9Y5G6 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA7Q9Y5G6 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDHGA7Q9Y5G6 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA7Q9Y5G6 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.99■□□□□ 0.31
PCDHGA7Q9Y5G6 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.99■□□□□ 0.31
PCDHGA7Q9Y5G6 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHGA7Q9Y5G6 MIR3687-2-201ENST00000577708 61 ntBASIC16.99■□□□□ 0.31
PCDHGA7Q9Y5G6 NKAPP1-205ENST00000585790 367 ntBASIC16.99■□□□□ 0.31
PCDHGA7Q9Y5G6 MTDHP4-201ENST00000600287 670 ntBASIC16.99■□□□□ 0.31
PCDHGA7Q9Y5G6 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PCDHGA7Q9Y5G6 MIR3687-1-201ENST00000614492 61 ntBASIC16.99■□□□□ 0.31
PCDHGA7Q9Y5G6 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.99■□□□□ 0.31
PCDHGA7Q9Y5G6 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHGA7Q9Y5G6 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
PCDHGA7Q9Y5G6 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms