Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDHB1Q9Y5F3 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHB1Q9Y5F3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB1Q9Y5F3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDHB1Q9Y5F3 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHB1Q9Y5F3 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
PCDHB1Q9Y5F3 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHB1Q9Y5F3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDHB1Q9Y5F3 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB1Q9Y5F3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB1Q9Y5F3 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB1Q9Y5F3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
PCDHB1Q9Y5F3 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDHB1Q9Y5F3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB1Q9Y5F3 EGFEM1P-202ENST00000431685 1563 ntBASIC17.14■□□□□ 0.33
PCDHB1Q9Y5F3 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PCDHB1Q9Y5F3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB1Q9Y5F3 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB1Q9Y5F3 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB1Q9Y5F3 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB1Q9Y5F3 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB1Q9Y5F3 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB1Q9Y5F3 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PCDHB1Q9Y5F3 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB1Q9Y5F3 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PCDHB1Q9Y5F3 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHB1Q9Y5F3 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PCDHB1Q9Y5F3 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PCDHB1Q9Y5F3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PCDHB1Q9Y5F3 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB1Q9Y5F3 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB1Q9Y5F3 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB1Q9Y5F3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB1Q9Y5F3 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB1Q9Y5F3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB1Q9Y5F3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PCDHB1Q9Y5F3 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHB1Q9Y5F3 AC023274.1-201ENST00000418278 595 ntBASIC17.13■□□□□ 0.33
PCDHB1Q9Y5F3 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.13■□□□□ 0.33
PCDHB1Q9Y5F3 ACTG1P4-201ENST00000425123 1122 ntBASIC17.13■□□□□ 0.33
PCDHB1Q9Y5F3 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB1Q9Y5F3 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDHB1Q9Y5F3 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.13■□□□□ 0.33
PCDHB1Q9Y5F3 LINC02084-201ENST00000606069 1096 ntBASIC17.13■□□□□ 0.33
PCDHB1Q9Y5F3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PCDHB1Q9Y5F3 AC079781.4-201ENST00000641908 219 ntBASIC17.13■□□□□ 0.33
PCDHB1Q9Y5F3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB1Q9Y5F3 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB1Q9Y5F3 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHB1Q9Y5F3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB1Q9Y5F3 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB1Q9Y5F3 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PCDHB1Q9Y5F3 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHB1Q9Y5F3 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHB1Q9Y5F3 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHB1Q9Y5F3 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDHB1Q9Y5F3 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
PCDHB1Q9Y5F3 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHB1Q9Y5F3 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB1Q9Y5F3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PCDHB1Q9Y5F3 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB1Q9Y5F3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB1Q9Y5F3 PRORSD1P-202ENST00000563365 2154 ntBASIC17.12■□□□□ 0.33
PCDHB1Q9Y5F3 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB1Q9Y5F3 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB1Q9Y5F3 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHB1Q9Y5F3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB1Q9Y5F3 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB1Q9Y5F3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB1Q9Y5F3 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
PCDHB1Q9Y5F3 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB1Q9Y5F3 AC148477.5-201ENST00000625164 1645 ntBASIC17.12■□□□□ 0.33
PCDHB1Q9Y5F3 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB1Q9Y5F3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
PCDHB1Q9Y5F3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB1Q9Y5F3 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PCDHB1Q9Y5F3 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB1Q9Y5F3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
PCDHB1Q9Y5F3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB1Q9Y5F3 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.12■□□□□ 0.33
PCDHB1Q9Y5F3 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB1Q9Y5F3 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB1Q9Y5F3 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHB1Q9Y5F3 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHB1Q9Y5F3 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PCDHB1Q9Y5F3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB1Q9Y5F3 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB1Q9Y5F3 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB1Q9Y5F3 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHB1Q9Y5F3 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB1Q9Y5F3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB1Q9Y5F3 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB1Q9Y5F3 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB1Q9Y5F3 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB1Q9Y5F3 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDHB1Q9Y5F3 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PCDHB1Q9Y5F3 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHB1Q9Y5F3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB1Q9Y5F3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB1Q9Y5F3 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms