Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHB11Q9Y5F2 AP002414.3-201ENST00000589352 1468 ntBASIC16.81■□□□□ 0.28
PCDHB11Q9Y5F2 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB11Q9Y5F2 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PCDHB11Q9Y5F2 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB11Q9Y5F2 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDHB11Q9Y5F2 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB11Q9Y5F2 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB11Q9Y5F2 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.81■□□□□ 0.28
PCDHB11Q9Y5F2 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB11Q9Y5F2 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDHB11Q9Y5F2 AC004832.2-201ENST00000426397 482 ntBASIC16.81■□□□□ 0.28
PCDHB11Q9Y5F2 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHB11Q9Y5F2 AC007967.2-201ENST00000432613 625 ntBASIC16.81■□□□□ 0.28
PCDHB11Q9Y5F2 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHB11Q9Y5F2 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.81■□□□□ 0.28
PCDHB11Q9Y5F2 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB11Q9Y5F2 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.81■□□□□ 0.28
PCDHB11Q9Y5F2 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHB11Q9Y5F2 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDHB11Q9Y5F2 AC244517.3-201ENST00000616254 1235 ntBASIC16.81■□□□□ 0.28
PCDHB11Q9Y5F2 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB11Q9Y5F2 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDHB11Q9Y5F2 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB11Q9Y5F2 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB11Q9Y5F2 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB11Q9Y5F2 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB11Q9Y5F2 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PCDHB11Q9Y5F2 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB11Q9Y5F2 AC106820.2-201ENST00000563775 3264 ntBASIC16.81■□□□□ 0.28
PCDHB11Q9Y5F2 AC148477.5-201ENST00000625164 1645 ntBASIC16.81■□□□□ 0.28
PCDHB11Q9Y5F2 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB11Q9Y5F2 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB11Q9Y5F2 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB11Q9Y5F2 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB11Q9Y5F2 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB11Q9Y5F2 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB11Q9Y5F2 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB11Q9Y5F2 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB11Q9Y5F2 AC016396.2-201ENST00000562575 1417 ntBASIC16.8■□□□□ 0.28
PCDHB11Q9Y5F2 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB11Q9Y5F2 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHB11Q9Y5F2 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
PCDHB11Q9Y5F2 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB11Q9Y5F2 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB11Q9Y5F2 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHB11Q9Y5F2 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB11Q9Y5F2 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB11Q9Y5F2 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PCDHB11Q9Y5F2 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB11Q9Y5F2 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB11Q9Y5F2 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB11Q9Y5F2 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHB11Q9Y5F2 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.8■□□□□ 0.28
PCDHB11Q9Y5F2 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB11Q9Y5F2 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.8■□□□□ 0.28
PCDHB11Q9Y5F2 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHB11Q9Y5F2 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHB11Q9Y5F2 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.8■□□□□ 0.28
PCDHB11Q9Y5F2 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PCDHB11Q9Y5F2 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHB11Q9Y5F2 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB11Q9Y5F2 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
PCDHB11Q9Y5F2 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB11Q9Y5F2 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB11Q9Y5F2 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHB11Q9Y5F2 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PCDHB11Q9Y5F2 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHB11Q9Y5F2 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PCDHB11Q9Y5F2 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHB11Q9Y5F2 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
PCDHB11Q9Y5F2 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHB11Q9Y5F2 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHB11Q9Y5F2 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHB11Q9Y5F2 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDHB11Q9Y5F2 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
PCDHB11Q9Y5F2 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
PCDHB11Q9Y5F2 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHB11Q9Y5F2 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHB11Q9Y5F2 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHB11Q9Y5F2 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHB11Q9Y5F2 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHB11Q9Y5F2 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDHB11Q9Y5F2 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHB11Q9Y5F2 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PCDHB11Q9Y5F2 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDHB11Q9Y5F2 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHB11Q9Y5F2 AD000864.1-201ENST00000624076 2295 ntBASIC16.79■□□□□ 0.28
PCDHB11Q9Y5F2 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHB11Q9Y5F2 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
PCDHB11Q9Y5F2 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
PCDHB11Q9Y5F2 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.79■□□□□ 0.28
PCDHB11Q9Y5F2 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDHB11Q9Y5F2 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHB11Q9Y5F2 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.79■□□□□ 0.28
PCDHB11Q9Y5F2 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PCDHB11Q9Y5F2 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHB11Q9Y5F2 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHB11Q9Y5F2 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDHB11Q9Y5F2 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms