Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
MRPS28Q9Y2Q9 AC097493.4-201ENST00000641197 219 ntBASIC14.79□□□□□ -0.04
MRPS28Q9Y2Q9 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
MRPS28Q9Y2Q9 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MRPS28Q9Y2Q9 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
MRPS28Q9Y2Q9 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
MRPS28Q9Y2Q9 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
MRPS28Q9Y2Q9 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.79□□□□□ -0.04
MRPS28Q9Y2Q9 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MRPS28Q9Y2Q9 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.79□□□□□ -0.04
MRPS28Q9Y2Q9 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 PKD1P5-201ENST00000532415 10291 ntBASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 SPDYE13P-201ENST00000445314 798 ntBASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 AC011840.4-201ENST00000578471 627 ntBASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 AC006011.2-201ENST00000621313 1158 ntBASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 CLN6-214ENST00000636314 442 ntTSL 3 BASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MRPS28Q9Y2Q9 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
MRPS28Q9Y2Q9 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.77□□□□□ -0.04
MRPS28Q9Y2Q9 AL135999.2-201ENST00000622438 1686 ntBASIC14.77□□□□□ -0.04
MRPS28Q9Y2Q9 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
MRPS28Q9Y2Q9 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.77□□□□□ -0.04
MRPS28Q9Y2Q9 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.77□□□□□ -0.04
MRPS28Q9Y2Q9 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
MRPS28Q9Y2Q9 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
MRPS28Q9Y2Q9 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
MRPS28Q9Y2Q9 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
MRPS28Q9Y2Q9 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
MRPS28Q9Y2Q9 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
MRPS28Q9Y2Q9 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
MRPS28Q9Y2Q9 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
MRPS28Q9Y2Q9 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.04
MRPS28Q9Y2Q9 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
MRPS28Q9Y2Q9 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.77□□□□□ -0.04
MRPS28Q9Y2Q9 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
MRPS28Q9Y2Q9 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
MRPS28Q9Y2Q9 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.77□□□□□ -0.05
MRPS28Q9Y2Q9 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
MRPS28Q9Y2Q9 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
MRPS28Q9Y2Q9 AL645929.1-201ENST00000420084 975 ntBASIC14.77□□□□□ -0.05
MRPS28Q9Y2Q9 TSPY22P-201ENST00000427496 604 ntBASIC14.77□□□□□ -0.05
MRPS28Q9Y2Q9 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.77□□□□□ -0.05
MRPS28Q9Y2Q9 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC14.77□□□□□ -0.05
MRPS28Q9Y2Q9 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.77□□□□□ -0.05
MRPS28Q9Y2Q9 RN7SL606P-201ENST00000472779 293 ntBASIC14.77□□□□□ -0.05
MRPS28Q9Y2Q9 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.77□□□□□ -0.05
MRPS28Q9Y2Q9 STK19B-204ENST00000512515 211 ntBASIC14.77□□□□□ -0.05
MRPS28Q9Y2Q9 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
MRPS28Q9Y2Q9 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.77□□□□□ -0.05
MRPS28Q9Y2Q9 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC14.77□□□□□ -0.05
MRPS28Q9Y2Q9 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.77□□□□□ -0.05
MRPS28Q9Y2Q9 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC14.77□□□□□ -0.05
MRPS28Q9Y2Q9 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC14.77□□□□□ -0.05
MRPS28Q9Y2Q9 AC005336.2-201ENST00000593183 939 ntBASIC14.77□□□□□ -0.05
MRPS28Q9Y2Q9 AC083849.1-201ENST00000615227 514 ntBASIC14.77□□□□□ -0.05
MRPS28Q9Y2Q9 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.77□□□□□ -0.05
MRPS28Q9Y2Q9 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.77□□□□□ -0.05
MRPS28Q9Y2Q9 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
MRPS28Q9Y2Q9 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
MRPS28Q9Y2Q9 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms