Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FNDC3AQ9Y2H6 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.55■□□□□ 0.4
FNDC3AQ9Y2H6 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.55■□□□□ 0.4
FNDC3AQ9Y2H6 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 AC139713.2-201ENST00000641328 2723 ntBASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 DNAJB3-201ENST00000446806 729 ntBASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 AC004967.1-201ENST00000453589 447 ntBASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 RNA5SP416-201ENST00000516838 111 ntBASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 AC019129.2-201ENST00000609837 1235 ntBASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 LINC01451-201ENST00000623792 534 ntBASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 LETM1P2-201ENST00000597330 2178 ntBASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FNDC3AQ9Y2H6 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
FNDC3AQ9Y2H6 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
FNDC3AQ9Y2H6 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FNDC3AQ9Y2H6 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FNDC3AQ9Y2H6 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.53■□□□□ 0.4
FNDC3AQ9Y2H6 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FNDC3AQ9Y2H6 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FNDC3AQ9Y2H6 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FNDC3AQ9Y2H6 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FNDC3AQ9Y2H6 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
FNDC3AQ9Y2H6 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
FNDC3AQ9Y2H6 LAGE3P1-201ENST00000425356 484 ntBASIC17.53■□□□□ 0.4
FNDC3AQ9Y2H6 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.53■□□□□ 0.4
FNDC3AQ9Y2H6 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.53■□□□□ 0.4
FNDC3AQ9Y2H6 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
FNDC3AQ9Y2H6 AC122714.2-201ENST00000502787 707 ntBASIC17.53■□□□□ 0.4
FNDC3AQ9Y2H6 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.53■□□□□ 0.4
FNDC3AQ9Y2H6 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.53■□□□□ 0.4
FNDC3AQ9Y2H6 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.53■□□□□ 0.4
FNDC3AQ9Y2H6 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FNDC3AQ9Y2H6 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.53■□□□□ 0.4
FNDC3AQ9Y2H6 AP000867.4-201ENST00000641616 219 ntBASIC17.53■□□□□ 0.4
FNDC3AQ9Y2H6 AC134684.3-201ENST00000641758 218 ntBASIC17.53■□□□□ 0.4
FNDC3AQ9Y2H6 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
FNDC3AQ9Y2H6 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
FNDC3AQ9Y2H6 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.53■□□□□ 0.4
FNDC3AQ9Y2H6 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
FNDC3AQ9Y2H6 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.53■□□□□ 0.4
FNDC3AQ9Y2H6 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FNDC3AQ9Y2H6 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
FNDC3AQ9Y2H6 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
FNDC3AQ9Y2H6 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.52■□□□□ 0.4
FNDC3AQ9Y2H6 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
FNDC3AQ9Y2H6 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
FNDC3AQ9Y2H6 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.52■□□□□ 0.4
FNDC3AQ9Y2H6 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
FNDC3AQ9Y2H6 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
FNDC3AQ9Y2H6 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
FNDC3AQ9Y2H6 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
FNDC3AQ9Y2H6 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FNDC3AQ9Y2H6 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.52■□□□□ 0.4
FNDC3AQ9Y2H6 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FNDC3AQ9Y2H6 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FNDC3AQ9Y2H6 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FNDC3AQ9Y2H6 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FNDC3AQ9Y2H6 LYSMD4-203ENST00000378904 2122 ntBASIC17.52■□□□□ 0.4
FNDC3AQ9Y2H6 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
FNDC3AQ9Y2H6 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.52■□□□□ 0.4
FNDC3AQ9Y2H6 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.52■□□□□ 0.4
FNDC3AQ9Y2H6 AC009947.1-201ENST00000444350 727 ntBASIC17.52■□□□□ 0.4
FNDC3AQ9Y2H6 BX005266.1-201ENST00000473402 457 ntBASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms