Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
COPS3Q9UNS2 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.32■□□□□ 0.04
COPS3Q9UNS2 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
COPS3Q9UNS2 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.32■□□□□ 0.04
COPS3Q9UNS2 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC15.32■□□□□ 0.04
COPS3Q9UNS2 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.32■□□□□ 0.04
COPS3Q9UNS2 AC092647.4-201ENST00000457211 535 ntBASIC15.32■□□□□ 0.04
COPS3Q9UNS2 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.32■□□□□ 0.04
COPS3Q9UNS2 GUSBP12-201ENST00000513727 720 ntBASIC15.32■□□□□ 0.04
COPS3Q9UNS2 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.32■□□□□ 0.04
COPS3Q9UNS2 AL592071.1-201ENST00000611956 408 ntBASIC15.32■□□□□ 0.04
COPS3Q9UNS2 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
COPS3Q9UNS2 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
COPS3Q9UNS2 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COPS3Q9UNS2 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COPS3Q9UNS2 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.32■□□□□ 0.04
COPS3Q9UNS2 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COPS3Q9UNS2 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
COPS3Q9UNS2 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.32■□□□□ 0.04
COPS3Q9UNS2 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.32■□□□□ 0.04
COPS3Q9UNS2 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
COPS3Q9UNS2 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COPS3Q9UNS2 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
COPS3Q9UNS2 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.32■□□□□ 0.04
COPS3Q9UNS2 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
COPS3Q9UNS2 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.32■□□□□ 0.04
COPS3Q9UNS2 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
COPS3Q9UNS2 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
COPS3Q9UNS2 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
COPS3Q9UNS2 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
COPS3Q9UNS2 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COPS3Q9UNS2 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COPS3Q9UNS2 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
COPS3Q9UNS2 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.31■□□□□ 0.04
COPS3Q9UNS2 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.31■□□□□ 0.04
COPS3Q9UNS2 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
COPS3Q9UNS2 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COPS3Q9UNS2 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
COPS3Q9UNS2 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COPS3Q9UNS2 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
COPS3Q9UNS2 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.31■□□□□ 0.04
COPS3Q9UNS2 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COPS3Q9UNS2 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COPS3Q9UNS2 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
COPS3Q9UNS2 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
COPS3Q9UNS2 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.31■□□□□ 0.04
COPS3Q9UNS2 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.31■□□□□ 0.04
COPS3Q9UNS2 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COPS3Q9UNS2 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.31■□□□□ 0.04
COPS3Q9UNS2 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.31■□□□□ 0.04
COPS3Q9UNS2 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COPS3Q9UNS2 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.31■□□□□ 0.04
COPS3Q9UNS2 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.31■□□□□ 0.04
COPS3Q9UNS2 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.31■□□□□ 0.04
COPS3Q9UNS2 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COPS3Q9UNS2 STK25P1-201ENST00000585406 838 ntBASIC15.31■□□□□ 0.04
COPS3Q9UNS2 AL353801.3-201ENST00000609898 542 ntBASIC15.31■□□□□ 0.04
COPS3Q9UNS2 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.31■□□□□ 0.04
COPS3Q9UNS2 AC124864.1-201ENST00000623408 392 ntBASIC15.31■□□□□ 0.04
COPS3Q9UNS2 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.31■□□□□ 0.04
COPS3Q9UNS2 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
COPS3Q9UNS2 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
COPS3Q9UNS2 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COPS3Q9UNS2 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
COPS3Q9UNS2 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COPS3Q9UNS2 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
COPS3Q9UNS2 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.31■□□□□ 0.04
COPS3Q9UNS2 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COPS3Q9UNS2 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COPS3Q9UNS2 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COPS3Q9UNS2 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
COPS3Q9UNS2 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.31■□□□□ 0.04
COPS3Q9UNS2 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
COPS3Q9UNS2 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
COPS3Q9UNS2 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COPS3Q9UNS2 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COPS3Q9UNS2 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
COPS3Q9UNS2 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
COPS3Q9UNS2 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COPS3Q9UNS2 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
COPS3Q9UNS2 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
COPS3Q9UNS2 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COPS3Q9UNS2 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COPS3Q9UNS2 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.3■□□□□ 0.04
COPS3Q9UNS2 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.3■□□□□ 0.04
COPS3Q9UNS2 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COPS3Q9UNS2 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
COPS3Q9UNS2 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COPS3Q9UNS2 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COPS3Q9UNS2 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.3■□□□□ 0.04
COPS3Q9UNS2 AL645929.1-201ENST00000420084 975 ntBASIC15.3■□□□□ 0.04
COPS3Q9UNS2 TSPY22P-201ENST00000427496 604 ntBASIC15.3■□□□□ 0.04
COPS3Q9UNS2 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.3■□□□□ 0.04
COPS3Q9UNS2 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COPS3Q9UNS2 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COPS3Q9UNS2 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COPS3Q9UNS2 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.3■□□□□ 0.04
COPS3Q9UNS2 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.3■□□□□ 0.04
COPS3Q9UNS2 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.3■□□□□ 0.04
COPS3Q9UNS2 AC111152.3-201ENST00000569699 673 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms