Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
NCDNQ9UBB6 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NCDNQ9UBB6 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NCDNQ9UBB6 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NCDNQ9UBB6 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NCDNQ9UBB6 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC16.94■□□□□ 0.3
NCDNQ9UBB6 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.94■□□□□ 0.3
NCDNQ9UBB6 AC027369.6-201ENST00000525520 931 ntBASIC16.94■□□□□ 0.3
NCDNQ9UBB6 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.94■□□□□ 0.3
NCDNQ9UBB6 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
NCDNQ9UBB6 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.94■□□□□ 0.3
NCDNQ9UBB6 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.94■□□□□ 0.3
NCDNQ9UBB6 AC116407.2-201ENST00000613639 860 ntBASIC16.94■□□□□ 0.3
NCDNQ9UBB6 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.94■□□□□ 0.3
NCDNQ9UBB6 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NCDNQ9UBB6 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.94■□□□□ 0.3
NCDNQ9UBB6 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NCDNQ9UBB6 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.94■□□□□ 0.3
NCDNQ9UBB6 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NCDNQ9UBB6 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NCDNQ9UBB6 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
NCDNQ9UBB6 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
NCDNQ9UBB6 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.94■□□□□ 0.3
NCDNQ9UBB6 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
NCDNQ9UBB6 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
NCDNQ9UBB6 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NCDNQ9UBB6 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
NCDNQ9UBB6 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCDNQ9UBB6 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCDNQ9UBB6 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCDNQ9UBB6 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.93■□□□□ 0.3
NCDNQ9UBB6 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCDNQ9UBB6 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCDNQ9UBB6 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.93■□□□□ 0.3
NCDNQ9UBB6 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NCDNQ9UBB6 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCDNQ9UBB6 BX276092.7-203ENST00000637198 1536 ntBASIC16.93■□□□□ 0.3
NCDNQ9UBB6 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.93■□□□□ 0.3
NCDNQ9UBB6 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
NCDNQ9UBB6 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.93■□□□□ 0.3
NCDNQ9UBB6 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.93■□□□□ 0.3
NCDNQ9UBB6 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.93■□□□□ 0.3
NCDNQ9UBB6 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.93■□□□□ 0.3
NCDNQ9UBB6 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.93■□□□□ 0.3
NCDNQ9UBB6 DUTP2-201ENST00000519164 463 ntBASIC16.93■□□□□ 0.3
NCDNQ9UBB6 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.93■□□□□ 0.3
NCDNQ9UBB6 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.93■□□□□ 0.3
NCDNQ9UBB6 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.93■□□□□ 0.3
NCDNQ9UBB6 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.93■□□□□ 0.3
NCDNQ9UBB6 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.93■□□□□ 0.3
NCDNQ9UBB6 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.93■□□□□ 0.3
NCDNQ9UBB6 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCDNQ9UBB6 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCDNQ9UBB6 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
NCDNQ9UBB6 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.93■□□□□ 0.3
NCDNQ9UBB6 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCDNQ9UBB6 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.93■□□□□ 0.3
NCDNQ9UBB6 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NCDNQ9UBB6 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NCDNQ9UBB6 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCDNQ9UBB6 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
NCDNQ9UBB6 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
NCDNQ9UBB6 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
NCDNQ9UBB6 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.93■□□□□ 0.3
NCDNQ9UBB6 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
NCDNQ9UBB6 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCDNQ9UBB6 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCDNQ9UBB6 AC093010.1-201ENST00000473625 1624 ntBASIC16.92■□□□□ 0.3
NCDNQ9UBB6 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCDNQ9UBB6 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.92■□□□□ 0.3
NCDNQ9UBB6 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCDNQ9UBB6 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
NCDNQ9UBB6 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCDNQ9UBB6 MYCLP1-201ENST00000372451 1075 ntBASIC16.92■□□□□ 0.3
NCDNQ9UBB6 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.92■□□□□ 0.3
NCDNQ9UBB6 MRPS18AP1-201ENST00000414458 589 ntBASIC16.92■□□□□ 0.3
NCDNQ9UBB6 RPS2P32-201ENST00000439199 892 ntBASIC16.92■□□□□ 0.3
NCDNQ9UBB6 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.92■□□□□ 0.3
NCDNQ9UBB6 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.92■□□□□ 0.3
NCDNQ9UBB6 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.92■□□□□ 0.3
NCDNQ9UBB6 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.92■□□□□ 0.3
NCDNQ9UBB6 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.92■□□□□ 0.3
NCDNQ9UBB6 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCDNQ9UBB6 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCDNQ9UBB6 AC073592.8-201ENST00000624126 511 ntBASIC16.92■□□□□ 0.3
NCDNQ9UBB6 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.92■□□□□ 0.3
NCDNQ9UBB6 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.92■□□□□ 0.3
NCDNQ9UBB6 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
NCDNQ9UBB6 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCDNQ9UBB6 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.92■□□□□ 0.3
NCDNQ9UBB6 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NCDNQ9UBB6 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.92■□□□□ 0.3
NCDNQ9UBB6 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCDNQ9UBB6 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCDNQ9UBB6 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCDNQ9UBB6 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCDNQ9UBB6 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NCDNQ9UBB6 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCDNQ9UBB6 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCDNQ9UBB6 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms