Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MKKSQ9NPJ1 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MKKSQ9NPJ1 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MKKSQ9NPJ1 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.23■□□□□ 0.19
MKKSQ9NPJ1 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
MKKSQ9NPJ1 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
MKKSQ9NPJ1 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MKKSQ9NPJ1 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MKKSQ9NPJ1 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
MKKSQ9NPJ1 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MKKSQ9NPJ1 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
MKKSQ9NPJ1 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
MKKSQ9NPJ1 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MKKSQ9NPJ1 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
MKKSQ9NPJ1 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
MKKSQ9NPJ1 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MKKSQ9NPJ1 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MKKSQ9NPJ1 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MKKSQ9NPJ1 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
MKKSQ9NPJ1 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
MKKSQ9NPJ1 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
MKKSQ9NPJ1 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MKKSQ9NPJ1 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.22■□□□□ 0.19
MKKSQ9NPJ1 MRPL20P1-201ENST00000400819 433 ntBASIC16.22■□□□□ 0.19
MKKSQ9NPJ1 CRYGEP-201ENST00000412192 528 ntBASIC16.22■□□□□ 0.19
MKKSQ9NPJ1 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.22■□□□□ 0.19
MKKSQ9NPJ1 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.22■□□□□ 0.19
MKKSQ9NPJ1 KRT18P3-201ENST00000451602 1288 ntBASIC16.22■□□□□ 0.19
MKKSQ9NPJ1 POLD2P1-201ENST00000511220 997 ntBASIC16.22■□□□□ 0.19
MKKSQ9NPJ1 RNA5SP416-201ENST00000516838 111 ntBASIC16.22■□□□□ 0.19
MKKSQ9NPJ1 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MKKSQ9NPJ1 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.22■□□□□ 0.19
MKKSQ9NPJ1 MIR4751-201ENST00000578027 74 ntBASIC16.22■□□□□ 0.19
MKKSQ9NPJ1 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.22■□□□□ 0.19
MKKSQ9NPJ1 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.22■□□□□ 0.19
MKKSQ9NPJ1 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.22■□□□□ 0.19
MKKSQ9NPJ1 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.22■□□□□ 0.19
MKKSQ9NPJ1 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
MKKSQ9NPJ1 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MKKSQ9NPJ1 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
MKKSQ9NPJ1 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.22■□□□□ 0.19
MKKSQ9NPJ1 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.22■□□□□ 0.19
MKKSQ9NPJ1 PI4KAP1-204ENST00000612579 1703 ntBASIC16.22■□□□□ 0.19
MKKSQ9NPJ1 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
MKKSQ9NPJ1 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MKKSQ9NPJ1 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MKKSQ9NPJ1 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MKKSQ9NPJ1 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
MKKSQ9NPJ1 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MKKSQ9NPJ1 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MKKSQ9NPJ1 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
MKKSQ9NPJ1 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
MKKSQ9NPJ1 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
MKKSQ9NPJ1 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
MKKSQ9NPJ1 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.21■□□□□ 0.19
MKKSQ9NPJ1 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
MKKSQ9NPJ1 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
MKKSQ9NPJ1 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MKKSQ9NPJ1 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
MKKSQ9NPJ1 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.21■□□□□ 0.19
MKKSQ9NPJ1 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MKKSQ9NPJ1 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MKKSQ9NPJ1 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
MKKSQ9NPJ1 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.21■□□□□ 0.19
MKKSQ9NPJ1 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
MKKSQ9NPJ1 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.21■□□□□ 0.19
MKKSQ9NPJ1 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.21■□□□□ 0.19
MKKSQ9NPJ1 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.21■□□□□ 0.19
MKKSQ9NPJ1 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.21■□□□□ 0.19
MKKSQ9NPJ1 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.21■□□□□ 0.19
MKKSQ9NPJ1 AC010654.1-201ENST00000615722 808 ntBASIC16.21■□□□□ 0.19
MKKSQ9NPJ1 AC004790.2-201ENST00000623588 572 ntBASIC16.21■□□□□ 0.19
MKKSQ9NPJ1 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MKKSQ9NPJ1 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MKKSQ9NPJ1 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MKKSQ9NPJ1 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.21■□□□□ 0.19
MKKSQ9NPJ1 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
MKKSQ9NPJ1 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.21■□□□□ 0.19
MKKSQ9NPJ1 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
MKKSQ9NPJ1 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.21■□□□□ 0.19
MKKSQ9NPJ1 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
MKKSQ9NPJ1 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
MKKSQ9NPJ1 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.18
MKKSQ9NPJ1 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
MKKSQ9NPJ1 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
MKKSQ9NPJ1 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
MKKSQ9NPJ1 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
MKKSQ9NPJ1 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MKKSQ9NPJ1 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.2■□□□□ 0.18
MKKSQ9NPJ1 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MKKSQ9NPJ1 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
MKKSQ9NPJ1 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.2■□□□□ 0.18
MKKSQ9NPJ1 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MKKSQ9NPJ1 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
MKKSQ9NPJ1 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MKKSQ9NPJ1 AL023806.1-201ENST00000603994 1649 ntBASIC16.2■□□□□ 0.18
MKKSQ9NPJ1 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
MKKSQ9NPJ1 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MKKSQ9NPJ1 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MKKSQ9NPJ1 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms