Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC19.16■□□□□ 0.66
CBX8Q9HC52 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.16■□□□□ 0.66
CBX8Q9HC52 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.16■□□□□ 0.66
CBX8Q9HC52 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CBX8Q9HC52 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CBX8Q9HC52 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CBX8Q9HC52 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CBX8Q9HC52 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC19.16■□□□□ 0.66
CBX8Q9HC52 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CBX8Q9HC52 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CBX8Q9HC52 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CBX8Q9HC52 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CBX8Q9HC52 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.16■□□□□ 0.66
CBX8Q9HC52 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.16■□□□□ 0.66
CBX8Q9HC52 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CBX8Q9HC52 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.16■□□□□ 0.66
CBX8Q9HC52 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CBX8Q9HC52 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CBX8Q9HC52 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.16■□□□□ 0.66
CBX8Q9HC52 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CBX8Q9HC52 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CBX8Q9HC52 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CBX8Q9HC52 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC19.16■□□□□ 0.66
CBX8Q9HC52 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CBX8Q9HC52 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CBX8Q9HC52 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CBX8Q9HC52 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.16■□□□□ 0.66
CBX8Q9HC52 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.15■□□□□ 0.66
CBX8Q9HC52 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CBX8Q9HC52 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC19.15■□□□□ 0.66
CBX8Q9HC52 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
CBX8Q9HC52 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CBX8Q9HC52 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CBX8Q9HC52 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.15■□□□□ 0.66
CBX8Q9HC52 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CBX8Q9HC52 AC122714.2-201ENST00000502787 707 ntBASIC19.15■□□□□ 0.66
CBX8Q9HC52 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.15■□□□□ 0.66
CBX8Q9HC52 RNF126P1-202ENST00000569893 925 ntBASIC19.15■□□□□ 0.66
CBX8Q9HC52 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.15■□□□□ 0.66
CBX8Q9HC52 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC19.15■□□□□ 0.66
CBX8Q9HC52 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CBX8Q9HC52 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CBX8Q9HC52 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC19.15■□□□□ 0.66
CBX8Q9HC52 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
CBX8Q9HC52 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC19.15■□□□□ 0.66
CBX8Q9HC52 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CBX8Q9HC52 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.15■□□□□ 0.66
CBX8Q9HC52 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CBX8Q9HC52 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC19.14■□□□□ 0.66
CBX8Q9HC52 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.14■□□□□ 0.66
CBX8Q9HC52 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.14■□□□□ 0.66
CBX8Q9HC52 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CBX8Q9HC52 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CBX8Q9HC52 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CBX8Q9HC52 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CBX8Q9HC52 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.14■□□□□ 0.65
CBX8Q9HC52 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.14■□□□□ 0.65
CBX8Q9HC52 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
CBX8Q9HC52 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
CBX8Q9HC52 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CBX8Q9HC52 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.14■□□□□ 0.65
CBX8Q9HC52 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CBX8Q9HC52 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CBX8Q9HC52 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.14■□□□□ 0.65
CBX8Q9HC52 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.14■□□□□ 0.65
CBX8Q9HC52 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC19.14■□□□□ 0.65
CBX8Q9HC52 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CBX8Q9HC52 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.14■□□□□ 0.65
CBX8Q9HC52 COX11P1-201ENST00000489116 835 ntBASIC19.14■□□□□ 0.65
CBX8Q9HC52 AC111152.3-201ENST00000569699 673 ntBASIC19.14■□□□□ 0.65
CBX8Q9HC52 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.14■□□□□ 0.65
CBX8Q9HC52 AC011558.1-201ENST00000623459 338 ntBASIC19.14■□□□□ 0.65
CBX8Q9HC52 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.14■□□□□ 0.65
CBX8Q9HC52 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
CBX8Q9HC52 BANP-201ENST00000286122 2368 ntTSL 5 BASIC19.14■□□□□ 0.65
CBX8Q9HC52 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CBX8Q9HC52 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC19.14■□□□□ 0.65
CBX8Q9HC52 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.14■□□□□ 0.65
CBX8Q9HC52 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CBX8Q9HC52 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CBX8Q9HC52 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.14■□□□□ 0.65
CBX8Q9HC52 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CBX8Q9HC52 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CBX8Q9HC52 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CBX8Q9HC52 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CBX8Q9HC52 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
CBX8Q9HC52 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.13■□□□□ 0.65
CBX8Q9HC52 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.13■□□□□ 0.65
CBX8Q9HC52 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CBX8Q9HC52 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
CBX8Q9HC52 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CBX8Q9HC52 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC19.13■□□□□ 0.65
CBX8Q9HC52 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CBX8Q9HC52 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CBX8Q9HC52 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CBX8Q9HC52 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CBX8Q9HC52 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CBX8Q9HC52 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.13■□□□□ 0.65
CBX8Q9HC52 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CBX8Q9HC52 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms