Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 LINC01451-201ENST00000623792 534 ntBASIC11.98□□□□□ -0.49
UPK3BQ9BT76 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 ABBA01031661.1-201ENST00000634362 1253 ntBASIC11.98□□□□□ -0.49
UPK3BQ9BT76 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 AC009336.1-201ENST00000608941 1553 ntBASIC11.97□□□□□ -0.49
UPK3BQ9BT76 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 NCF1C-201ENST00000438382 1427 ntBASIC11.97□□□□□ -0.49
UPK3BQ9BT76 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 ETFA-208ENST00000559602 792 ntTSL 3 BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 AC105339.3-201ENST00000560043 636 ntBASIC11.97□□□□□ -0.49
UPK3BQ9BT76 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC11.97□□□□□ -0.49
UPK3BQ9BT76 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 HARS-201ENST00000307633 1780 ntTSL 2 BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC11.97□□□□□ -0.49
UPK3BQ9BT76 AC007326.2-201ENST00000624224 7579 ntBASIC11.97□□□□□ -0.49
UPK3BQ9BT76 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
UPK3BQ9BT76 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC11.96□□□□□ -0.49
UPK3BQ9BT76 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
UPK3BQ9BT76 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
UPK3BQ9BT76 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
UPK3BQ9BT76 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
UPK3BQ9BT76 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
UPK3BQ9BT76 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC11.96□□□□□ -0.49
UPK3BQ9BT76 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
UPK3BQ9BT76 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC11.96□□□□□ -0.49
UPK3BQ9BT76 AC243591.1-201ENST00000452967 1364 ntBASIC11.96□□□□□ -0.49
UPK3BQ9BT76 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
UPK3BQ9BT76 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC11.96□□□□□ -0.49
UPK3BQ9BT76 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms