Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC22.42■■□□□ 1.18
ABCA3Q99758 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
ABCA3Q99758 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC22.42■■□□□ 1.18
ABCA3Q99758 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC22.42■■□□□ 1.18
ABCA3Q99758 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC22.42■■□□□ 1.18
ABCA3Q99758 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
ABCA3Q99758 RN7SL618P-201ENST00000477850 296 ntBASIC22.42■■□□□ 1.18
ABCA3Q99758 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC22.42■■□□□ 1.18
ABCA3Q99758 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC22.42■■□□□ 1.18
ABCA3Q99758 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
ABCA3Q99758 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ABCA3Q99758 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ABCA3Q99758 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ABCA3Q99758 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
ABCA3Q99758 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
ABCA3Q99758 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC22.41■■□□□ 1.18
ABCA3Q99758 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
ABCA3Q99758 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
ABCA3Q99758 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC22.41■■□□□ 1.18
ABCA3Q99758 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
ABCA3Q99758 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
ABCA3Q99758 RBM39-205ENST00000397370 612 ntTSL 2 BASIC22.41■■□□□ 1.18
ABCA3Q99758 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC22.41■■□□□ 1.18
ABCA3Q99758 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC22.41■■□□□ 1.18
ABCA3Q99758 RAB35-202ENST00000534951 939 ntTSL 2 BASIC22.41■■□□□ 1.18
ABCA3Q99758 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
ABCA3Q99758 AC105021.1-202ENST00000570572 669 ntBASIC22.41■■□□□ 1.18
ABCA3Q99758 MIR6799-201ENST00000620297 69 ntBASIC22.41■■□□□ 1.18
ABCA3Q99758 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
ABCA3Q99758 AL023806.1-201ENST00000603994 1649 ntBASIC22.41■■□□□ 1.18
ABCA3Q99758 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
ABCA3Q99758 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC22.41■■□□□ 1.18
ABCA3Q99758 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
ABCA3Q99758 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
ABCA3Q99758 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC22.4■■□□□ 1.18
ABCA3Q99758 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ABCA3Q99758 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC22.4■■□□□ 1.18
ABCA3Q99758 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
ABCA3Q99758 NOP2-211ENST00000540228 668 ntTSL 2 BASIC22.4■■□□□ 1.18
ABCA3Q99758 AC099568.2-201ENST00000609194 695 ntBASIC22.4■■□□□ 1.18
ABCA3Q99758 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC22.4■■□□□ 1.18
ABCA3Q99758 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC22.4■■□□□ 1.18
ABCA3Q99758 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ABCA3Q99758 KRT8P49-201ENST00000604166 1432 ntBASIC22.4■■□□□ 1.18
ABCA3Q99758 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC22.4■■□□□ 1.18
ABCA3Q99758 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC22.4■■□□□ 1.18
ABCA3Q99758 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
ABCA3Q99758 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
ABCA3Q99758 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
ABCA3Q99758 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC22.4■■□□□ 1.18
ABCA3Q99758 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC22.4■■□□□ 1.18
ABCA3Q99758 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC22.4■■□□□ 1.18
ABCA3Q99758 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ABCA3Q99758 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
ABCA3Q99758 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC22.39■■□□□ 1.18
ABCA3Q99758 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.18
ABCA3Q99758 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC22.39■■□□□ 1.18
ABCA3Q99758 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
ABCA3Q99758 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
ABCA3Q99758 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
ABCA3Q99758 AC098850.1-201ENST00000419919 790 ntBASIC22.39■■□□□ 1.17
ABCA3Q99758 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC22.39■■□□□ 1.17
ABCA3Q99758 AC114501.2-201ENST00000439631 535 ntBASIC22.39■■□□□ 1.17
ABCA3Q99758 AC234783.1-201ENST00000441761 496 ntBASIC22.39■■□□□ 1.17
ABCA3Q99758 AC022210.1-201ENST00000449856 793 ntBASIC22.39■■□□□ 1.17
ABCA3Q99758 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC22.39■■□□□ 1.17
ABCA3Q99758 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC22.39■■□□□ 1.17
ABCA3Q99758 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC22.39■■□□□ 1.17
ABCA3Q99758 RPSAP52-203ENST00000622976 1023 ntBASIC22.39■■□□□ 1.17
ABCA3Q99758 GOLGA2P9-201ENST00000596977 1937 ntBASIC22.39■■□□□ 1.17
ABCA3Q99758 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC22.39■■□□□ 1.17
ABCA3Q99758 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC22.39■■□□□ 1.17
ABCA3Q99758 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
ABCA3Q99758 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC22.39■■□□□ 1.17
ABCA3Q99758 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
ABCA3Q99758 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
ABCA3Q99758 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
ABCA3Q99758 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ABCA3Q99758 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ABCA3Q99758 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
ABCA3Q99758 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC22.38■■□□□ 1.17
ABCA3Q99758 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC22.38■■□□□ 1.17
ABCA3Q99758 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC22.38■■□□□ 1.17
ABCA3Q99758 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ABCA3Q99758 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC22.38■■□□□ 1.17
ABCA3Q99758 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC22.38■■□□□ 1.17
ABCA3Q99758 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC22.38■■□□□ 1.17
ABCA3Q99758 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ABCA3Q99758 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC22.38■■□□□ 1.17
ABCA3Q99758 AP001350.2-201ENST00000625104 1094 ntBASIC22.38■■□□□ 1.17
ABCA3Q99758 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
ABCA3Q99758 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC22.38■■□□□ 1.17
ABCA3Q99758 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
ABCA3Q99758 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC22.38■■□□□ 1.17
ABCA3Q99758 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
ABCA3Q99758 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC22.38■■□□□ 1.17
ABCA3Q99758 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
ABCA3Q99758 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ABCA3Q99758 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
ABCA3Q99758 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms