Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP6Q96FZ7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
CHMP6Q96FZ7 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP6Q96FZ7 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.31■□□□□ 0.36
CHMP6Q96FZ7 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP6Q96FZ7 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP6Q96FZ7 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.31■□□□□ 0.36
CHMP6Q96FZ7 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.31■□□□□ 0.36
CHMP6Q96FZ7 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.31■□□□□ 0.36
CHMP6Q96FZ7 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP6Q96FZ7 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.31■□□□□ 0.36
CHMP6Q96FZ7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.31■□□□□ 0.36
CHMP6Q96FZ7 AC126177.1-201ENST00000547829 2218 ntBASIC17.31■□□□□ 0.36
CHMP6Q96FZ7 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.31■□□□□ 0.36
CHMP6Q96FZ7 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP6Q96FZ7 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.3■□□□□ 0.36
CHMP6Q96FZ7 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
CHMP6Q96FZ7 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP6Q96FZ7 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
CHMP6Q96FZ7 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.3■□□□□ 0.36
CHMP6Q96FZ7 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP6Q96FZ7 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP6Q96FZ7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.3■□□□□ 0.36
CHMP6Q96FZ7 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP6Q96FZ7 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP6Q96FZ7 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP6Q96FZ7 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CHMP6Q96FZ7 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CHMP6Q96FZ7 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP6Q96FZ7 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.3■□□□□ 0.36
CHMP6Q96FZ7 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.3■□□□□ 0.36
CHMP6Q96FZ7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CHMP6Q96FZ7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP6Q96FZ7 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.3■□□□□ 0.36
CHMP6Q96FZ7 AC093827.2-201ENST00000512654 315 ntBASIC17.3■□□□□ 0.36
CHMP6Q96FZ7 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.3■□□□□ 0.36
CHMP6Q96FZ7 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP6Q96FZ7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.3■□□□□ 0.36
CHMP6Q96FZ7 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.3■□□□□ 0.36
CHMP6Q96FZ7 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CHMP6Q96FZ7 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP6Q96FZ7 HLA-A-202ENST00000376806 1854 ntBASIC17.3■□□□□ 0.36
CHMP6Q96FZ7 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP6Q96FZ7 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
CHMP6Q96FZ7 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP6Q96FZ7 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
CHMP6Q96FZ7 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP6Q96FZ7 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP6Q96FZ7 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP6Q96FZ7 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CHMP6Q96FZ7 AC144831.1-201ENST00000573312 2656 ntBASIC17.29■□□□□ 0.36
CHMP6Q96FZ7 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.29■□□□□ 0.36
CHMP6Q96FZ7 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.29■□□□□ 0.36
CHMP6Q96FZ7 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP6Q96FZ7 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP6Q96FZ7 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CHMP6Q96FZ7 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP6Q96FZ7 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP6Q96FZ7 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP6Q96FZ7 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP6Q96FZ7 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP6Q96FZ7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP6Q96FZ7 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CHMP6Q96FZ7 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.29■□□□□ 0.36
CHMP6Q96FZ7 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP6Q96FZ7 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP6Q96FZ7 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP6Q96FZ7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP6Q96FZ7 KRT18P65-201ENST00000439811 1286 ntBASIC17.29■□□□□ 0.36
CHMP6Q96FZ7 BX088651.1-201ENST00000540551 451 ntBASIC17.29■□□□□ 0.36
CHMP6Q96FZ7 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.29■□□□□ 0.36
CHMP6Q96FZ7 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.29■□□□□ 0.36
CHMP6Q96FZ7 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP6Q96FZ7 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.29■□□□□ 0.36
CHMP6Q96FZ7 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP6Q96FZ7 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP6Q96FZ7 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP6Q96FZ7 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.29■□□□□ 0.36
CHMP6Q96FZ7 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.29■□□□□ 0.36
CHMP6Q96FZ7 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP6Q96FZ7 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CHMP6Q96FZ7 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP6Q96FZ7 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP6Q96FZ7 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CHMP6Q96FZ7 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP6Q96FZ7 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP6Q96FZ7 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.29■□□□□ 0.36
CHMP6Q96FZ7 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CHMP6Q96FZ7 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP6Q96FZ7 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP6Q96FZ7 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP6Q96FZ7 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP6Q96FZ7 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP6Q96FZ7 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP6Q96FZ7 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CHMP6Q96FZ7 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP6Q96FZ7 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CHMP6Q96FZ7 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.28■□□□□ 0.36
CHMP6Q96FZ7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CHMP6Q96FZ7 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms