Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC46Q96FV0 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.51■□□□□ 0.07
LRRC46Q96FV0 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
LRRC46Q96FV0 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC46Q96FV0 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
LRRC46Q96FV0 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC46Q96FV0 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC46Q96FV0 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
LRRC46Q96FV0 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
LRRC46Q96FV0 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC46Q96FV0 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC46Q96FV0 GNAS-203ENST00000306120 1878 ntBASIC15.5■□□□□ 0.07
LRRC46Q96FV0 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
LRRC46Q96FV0 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC46Q96FV0 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC46Q96FV0 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC46Q96FV0 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC46Q96FV0 AC135776.1-201ENST00000319817 2481 ntBASIC15.5■□□□□ 0.07
LRRC46Q96FV0 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
LRRC46Q96FV0 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC46Q96FV0 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.5■□□□□ 0.07
LRRC46Q96FV0 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.5■□□□□ 0.07
LRRC46Q96FV0 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
LRRC46Q96FV0 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC46Q96FV0 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.5■□□□□ 0.07
LRRC46Q96FV0 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.5■□□□□ 0.07
LRRC46Q96FV0 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.5■□□□□ 0.07
LRRC46Q96FV0 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC46Q96FV0 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.5■□□□□ 0.07
LRRC46Q96FV0 AC012640.2-201ENST00000561606 901 ntBASIC15.5■□□□□ 0.07
LRRC46Q96FV0 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.5■□□□□ 0.07
LRRC46Q96FV0 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.5■□□□□ 0.07
LRRC46Q96FV0 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.5■□□□□ 0.07
LRRC46Q96FV0 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.5■□□□□ 0.07
LRRC46Q96FV0 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC46Q96FV0 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC46Q96FV0 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC46Q96FV0 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC46Q96FV0 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
LRRC46Q96FV0 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
LRRC46Q96FV0 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC46Q96FV0 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC46Q96FV0 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC46Q96FV0 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC46Q96FV0 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC15.5■□□□□ 0.07
LRRC46Q96FV0 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
LRRC46Q96FV0 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.5■□□□□ 0.07
LRRC46Q96FV0 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC46Q96FV0 AL118508.1-201ENST00000613502 2345 ntBASIC15.5■□□□□ 0.07
LRRC46Q96FV0 AC093010.1-201ENST00000473625 1624 ntBASIC15.5■□□□□ 0.07
LRRC46Q96FV0 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC46Q96FV0 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
LRRC46Q96FV0 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 AC132938.6-201ENST00000623828 1655 ntBASIC15.49■□□□□ 0.07
LRRC46Q96FV0 AC003669.1-201ENST00000334569 611 ntBASIC15.49■□□□□ 0.07
LRRC46Q96FV0 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 SPDYE21P-201ENST00000413323 827 ntBASIC15.49■□□□□ 0.07
LRRC46Q96FV0 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 SIGLEC30P-201ENST00000455569 941 ntBASIC15.49■□□□□ 0.07
LRRC46Q96FV0 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 PGAM5P1-201ENST00000518923 814 ntBASIC15.49■□□□□ 0.07
LRRC46Q96FV0 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.49■□□□□ 0.07
LRRC46Q96FV0 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 AC068418.2-201ENST00000577309 3703 ntBASIC15.49■□□□□ 0.07
LRRC46Q96FV0 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
LRRC46Q96FV0 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms