Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
ATP2A3Q93084 DDX43P3-201ENST00000441064 443 ntBASIC18.08■□□□□ 0.48
ATP2A3Q93084 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.08■□□□□ 0.48
ATP2A3Q93084 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.08■□□□□ 0.48
ATP2A3Q93084 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.08■□□□□ 0.48
ATP2A3Q93084 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.08■□□□□ 0.48
ATP2A3Q93084 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.08■□□□□ 0.48
ATP2A3Q93084 AC010327.4-202ENST00000591484 748 ntBASIC18.08■□□□□ 0.48
ATP2A3Q93084 AL139424.1-201ENST00000607572 797 ntBASIC18.08■□□□□ 0.48
ATP2A3Q93084 AL691403.2-201ENST00000618460 490 ntBASIC18.08■□□□□ 0.48
ATP2A3Q93084 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.08■□□□□ 0.48
ATP2A3Q93084 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATP2A3Q93084 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
ATP2A3Q93084 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATP2A3Q93084 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATP2A3Q93084 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATP2A3Q93084 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
ATP2A3Q93084 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATP2A3Q93084 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.08■□□□□ 0.48
ATP2A3Q93084 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ATP2A3Q93084 FER1L4-210ENST00000615531 5998 ntBASIC18.08■□□□□ 0.48
ATP2A3Q93084 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.08■□□□□ 0.48
ATP2A3Q93084 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATP2A3Q93084 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATP2A3Q93084 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.07■□□□□ 0.48
ATP2A3Q93084 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A3Q93084 AC012313.1-201ENST00000593393 3059 ntBASIC18.07■□□□□ 0.48
ATP2A3Q93084 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A3Q93084 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A3Q93084 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A3Q93084 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.07■□□□□ 0.48
ATP2A3Q93084 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.07■□□□□ 0.48
ATP2A3Q93084 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A3Q93084 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A3Q93084 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
ATP2A3Q93084 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.07■□□□□ 0.48
ATP2A3Q93084 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A3Q93084 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A3Q93084 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
ATP2A3Q93084 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.07■□□□□ 0.48
ATP2A3Q93084 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
ATP2A3Q93084 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.07■□□□□ 0.48
ATP2A3Q93084 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
ATP2A3Q93084 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.07■□□□□ 0.48
ATP2A3Q93084 GPX1P2-201ENST00000429271 606 ntBASIC18.07■□□□□ 0.48
ATP2A3Q93084 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A3Q93084 AC092183.1-201ENST00000469884 875 ntBASIC18.07■□□□□ 0.48
ATP2A3Q93084 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.07■□□□□ 0.48
ATP2A3Q93084 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
ATP2A3Q93084 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.07■□□□□ 0.48
ATP2A3Q93084 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.07■□□□□ 0.48
ATP2A3Q93084 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.07■□□□□ 0.48
ATP2A3Q93084 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.07■□□□□ 0.48
ATP2A3Q93084 AC064836.3-201ENST00000607928 673 ntBASIC18.07■□□□□ 0.48
ATP2A3Q93084 AC019129.2-201ENST00000609837 1235 ntBASIC18.07■□□□□ 0.48
ATP2A3Q93084 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.07■□□□□ 0.48
ATP2A3Q93084 AC148477.5-201ENST00000625164 1645 ntBASIC18.07■□□□□ 0.48
ATP2A3Q93084 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A3Q93084 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A3Q93084 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A3Q93084 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
ATP2A3Q93084 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A3Q93084 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.07■□□□□ 0.48
ATP2A3Q93084 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A3Q93084 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A3Q93084 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
ATP2A3Q93084 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A3Q93084 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
ATP2A3Q93084 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ATP2A3Q93084 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.06■□□□□ 0.48
ATP2A3Q93084 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.06■□□□□ 0.48
ATP2A3Q93084 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP2A3Q93084 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP2A3Q93084 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
ATP2A3Q93084 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
ATP2A3Q93084 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP2A3Q93084 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.06■□□□□ 0.48
ATP2A3Q93084 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP2A3Q93084 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.06■□□□□ 0.48
ATP2A3Q93084 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP2A3Q93084 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ATP2A3Q93084 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
ATP2A3Q93084 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.06■□□□□ 0.48
ATP2A3Q93084 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP2A3Q93084 RPSAP43-201ENST00000402237 625 ntBASIC18.06■□□□□ 0.48
ATP2A3Q93084 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.06■□□□□ 0.48
ATP2A3Q93084 ELK2BP-201ENST00000415014 1224 ntBASIC18.06■□□□□ 0.48
ATP2A3Q93084 AC004832.2-201ENST00000426397 482 ntBASIC18.06■□□□□ 0.48
ATP2A3Q93084 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.06■□□□□ 0.48
ATP2A3Q93084 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.06■□□□□ 0.48
ATP2A3Q93084 IGHV3-52-201ENST00000519770 353 ntBASIC18.06■□□□□ 0.48
ATP2A3Q93084 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.06■□□□□ 0.48
ATP2A3Q93084 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.06■□□□□ 0.48
ATP2A3Q93084 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.06■□□□□ 0.48
ATP2A3Q93084 AC109462.3-201ENST00000573934 613 ntBASIC18.06■□□□□ 0.48
ATP2A3Q93084 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.06■□□□□ 0.48
ATP2A3Q93084 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.06■□□□□ 0.48
ATP2A3Q93084 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.06■□□□□ 0.48
ATP2A3Q93084 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP2A3Q93084 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms