Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC20.97■□□□□ 0.95
RPGRQ92834 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RPGRQ92834 U1.21-201ENST00000580816 167 ntBASIC20.97■□□□□ 0.95
RPGRQ92834 AC027307.2-201ENST00000591252 911 ntBASIC20.97■□□□□ 0.95
RPGRQ92834 LINC02560-201ENST00000596379 459 ntBASIC20.97■□□□□ 0.95
RPGRQ92834 AC008761.3-201ENST00000624803 892 ntBASIC20.97■□□□□ 0.95
RPGRQ92834 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC20.97■□□□□ 0.95
RPGRQ92834 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC20.97■□□□□ 0.95
RPGRQ92834 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RPGRQ92834 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
RPGRQ92834 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.97■□□□□ 0.95
RPGRQ92834 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
RPGRQ92834 GNAS-203ENST00000306120 1878 ntBASIC20.96■□□□□ 0.95
RPGRQ92834 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.96■□□□□ 0.95
RPGRQ92834 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.96■□□□□ 0.95
RPGRQ92834 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPGRQ92834 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPGRQ92834 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
RPGRQ92834 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC20.96■□□□□ 0.95
RPGRQ92834 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPGRQ92834 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RPGRQ92834 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPGRQ92834 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPGRQ92834 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RPGRQ92834 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RPGRQ92834 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RPGRQ92834 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPGRQ92834 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC20.96■□□□□ 0.95
RPGRQ92834 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPGRQ92834 EDF1-203ENST00000371649 790 ntTSL 2 BASIC20.96■□□□□ 0.95
RPGRQ92834 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPGRQ92834 AP000842.3-202ENST00000569238 1080 ntBASIC20.96■□□□□ 0.95
RPGRQ92834 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
RPGRQ92834 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC20.96■□□□□ 0.95
RPGRQ92834 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
RPGRQ92834 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RPGRQ92834 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RPGRQ92834 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
RPGRQ92834 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RPGRQ92834 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPGRQ92834 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC20.95■□□□□ 0.94
RPGRQ92834 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPGRQ92834 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPGRQ92834 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPGRQ92834 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPGRQ92834 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
RPGRQ92834 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RPGRQ92834 AC087289.5-201ENST00000586076 3175 ntBASIC20.95■□□□□ 0.94
RPGRQ92834 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPGRQ92834 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC20.95■□□□□ 0.94
RPGRQ92834 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC20.95■□□□□ 0.94
RPGRQ92834 AC097493.3-201ENST00000509725 367 ntBASIC20.95■□□□□ 0.94
RPGRQ92834 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC20.95■□□□□ 0.94
RPGRQ92834 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPGRQ92834 AC005225.4-201ENST00000557330 545 ntBASIC20.95■□□□□ 0.94
RPGRQ92834 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC20.95■□□□□ 0.94
RPGRQ92834 AC091167.2-201ENST00000579581 588 ntBASIC20.95■□□□□ 0.94
RPGRQ92834 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RPGRQ92834 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPGRQ92834 HFE2-206ENST00000634927 506 ntTSL 4 BASIC20.95■□□□□ 0.94
RPGRQ92834 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPGRQ92834 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPGRQ92834 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPGRQ92834 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.95■□□□□ 0.94
RPGRQ92834 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.95■□□□□ 0.94
RPGRQ92834 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPGRQ92834 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
RPGRQ92834 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC20.95■□□□□ 0.94
RPGRQ92834 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPGRQ92834 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC20.95■□□□□ 0.94
RPGRQ92834 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC20.95■□□□□ 0.94
RPGRQ92834 AL355312.1-201ENST00000407115 2176 ntBASIC20.95■□□□□ 0.94
RPGRQ92834 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RPGRQ92834 SLC22A20-204ENST00000530038 1673 ntBASIC20.94■□□□□ 0.94
RPGRQ92834 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPGRQ92834 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPGRQ92834 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPGRQ92834 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPGRQ92834 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
RPGRQ92834 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RPGRQ92834 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC20.94■□□□□ 0.94
RPGRQ92834 SSH2-211ENST00000590153 570 ntTSL 4 BASIC20.94■□□□□ 0.94
RPGRQ92834 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPGRQ92834 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.94■□□□□ 0.94
RPGRQ92834 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.94■□□□□ 0.94
RPGRQ92834 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPGRQ92834 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.94■□□□□ 0.94
RPGRQ92834 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPGRQ92834 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPGRQ92834 TOP3BP1-201ENST00000420768 1380 ntBASIC20.94■□□□□ 0.94
RPGRQ92834 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPGRQ92834 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPGRQ92834 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPGRQ92834 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPGRQ92834 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.94■□□□□ 0.94
RPGRQ92834 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPGRQ92834 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RPGRQ92834 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
RPGRQ92834 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPGRQ92834 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms