Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.19■□□□□ 0.34
SLC44A1Q8WWI5 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SLC44A1Q8WWI5 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SLC44A1Q8WWI5 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC44A1Q8WWI5 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SLC44A1Q8WWI5 PCDHA1-201ENST00000378133 2726 ntBASIC17.19■□□□□ 0.34
SLC44A1Q8WWI5 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC44A1Q8WWI5 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC44A1Q8WWI5 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC44A1Q8WWI5 TMPOP1-202ENST00000424642 1267 ntBASIC17.19■□□□□ 0.34
SLC44A1Q8WWI5 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC44A1Q8WWI5 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SLC44A1Q8WWI5 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.19■□□□□ 0.34
SLC44A1Q8WWI5 AL671277.2-201ENST00000458060 996 ntBASIC17.19■□□□□ 0.34
SLC44A1Q8WWI5 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.19■□□□□ 0.34
SLC44A1Q8WWI5 AC011467.2-201ENST00000598425 242 ntBASIC17.19■□□□□ 0.34
SLC44A1Q8WWI5 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.19■□□□□ 0.34
SLC44A1Q8WWI5 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SLC44A1Q8WWI5 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC44A1Q8WWI5 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.19■□□□□ 0.34
SLC44A1Q8WWI5 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
SLC44A1Q8WWI5 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC44A1Q8WWI5 AC008741.2-201ENST00000612792 3115 ntBASIC17.19■□□□□ 0.34
SLC44A1Q8WWI5 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC44A1Q8WWI5 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC44A1Q8WWI5 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC44A1Q8WWI5 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
SLC44A1Q8WWI5 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC44A1Q8WWI5 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC44A1Q8WWI5 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC44A1Q8WWI5 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC44A1Q8WWI5 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC44A1Q8WWI5 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.18■□□□□ 0.34
SLC44A1Q8WWI5 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC44A1Q8WWI5 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC44A1Q8WWI5 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC44A1Q8WWI5 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC44A1Q8WWI5 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.18■□□□□ 0.34
SLC44A1Q8WWI5 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC44A1Q8WWI5 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC44A1Q8WWI5 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC44A1Q8WWI5 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC44A1Q8WWI5 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SLC44A1Q8WWI5 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC44A1Q8WWI5 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.18■□□□□ 0.34
SLC44A1Q8WWI5 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.18■□□□□ 0.34
SLC44A1Q8WWI5 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.18■□□□□ 0.34
SLC44A1Q8WWI5 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC44A1Q8WWI5 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC44A1Q8WWI5 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.18■□□□□ 0.34
SLC44A1Q8WWI5 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.18■□□□□ 0.34
SLC44A1Q8WWI5 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC44A1Q8WWI5 AC011498.5-201ENST00000592027 486 ntBASIC17.18■□□□□ 0.34
SLC44A1Q8WWI5 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC44A1Q8WWI5 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC44A1Q8WWI5 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
SLC44A1Q8WWI5 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SLC44A1Q8WWI5 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SLC44A1Q8WWI5 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC44A1Q8WWI5 AC092364.2-201ENST00000596710 2692 ntBASIC17.18■□□□□ 0.34
SLC44A1Q8WWI5 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC44A1Q8WWI5 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC44A1Q8WWI5 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
SLC44A1Q8WWI5 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC44A1Q8WWI5 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC44A1Q8WWI5 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC44A1Q8WWI5 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.17■□□□□ 0.34
SLC44A1Q8WWI5 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC44A1Q8WWI5 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC44A1Q8WWI5 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.17■□□□□ 0.34
SLC44A1Q8WWI5 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC44A1Q8WWI5 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.17■□□□□ 0.34
SLC44A1Q8WWI5 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC44A1Q8WWI5 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC44A1Q8WWI5 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC44A1Q8WWI5 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC44A1Q8WWI5 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC44A1Q8WWI5 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC44A1Q8WWI5 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC44A1Q8WWI5 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC44A1Q8WWI5 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.17■□□□□ 0.34
SLC44A1Q8WWI5 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
SLC44A1Q8WWI5 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SLC44A1Q8WWI5 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SLC44A1Q8WWI5 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC44A1Q8WWI5 AC104076.2-201ENST00000448912 469 ntBASIC17.17■□□□□ 0.34
SLC44A1Q8WWI5 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC44A1Q8WWI5 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC44A1Q8WWI5 DUX4L17-201ENST00000557360 1267 ntBASIC17.17■□□□□ 0.34
SLC44A1Q8WWI5 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
SLC44A1Q8WWI5 AC073592.5-201ENST00000624854 528 ntBASIC17.17■□□□□ 0.34
SLC44A1Q8WWI5 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC44A1Q8WWI5 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC44A1Q8WWI5 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SLC44A1Q8WWI5 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC44A1Q8WWI5 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC44A1Q8WWI5 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC44A1Q8WWI5 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC44A1Q8WWI5 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.17■□□□□ 0.34
SLC44A1Q8WWI5 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms