Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SHKBP1Q8TBC3 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SHKBP1Q8TBC3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SHKBP1Q8TBC3 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SHKBP1Q8TBC3 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.97■□□□□ 0.47
SHKBP1Q8TBC3 PAWRP1-201ENST00000451083 565 ntBASIC17.97■□□□□ 0.47
SHKBP1Q8TBC3 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.97■□□□□ 0.47
SHKBP1Q8TBC3 AC091812.2-201ENST00000619081 385 ntBASIC17.97■□□□□ 0.47
SHKBP1Q8TBC3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SHKBP1Q8TBC3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SHKBP1Q8TBC3 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SHKBP1Q8TBC3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SHKBP1Q8TBC3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SHKBP1Q8TBC3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SHKBP1Q8TBC3 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SHKBP1Q8TBC3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SHKBP1Q8TBC3 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SHKBP1Q8TBC3 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHKBP1Q8TBC3 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHKBP1Q8TBC3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SHKBP1Q8TBC3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHKBP1Q8TBC3 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SHKBP1Q8TBC3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SHKBP1Q8TBC3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHKBP1Q8TBC3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHKBP1Q8TBC3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHKBP1Q8TBC3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.96■□□□□ 0.47
SHKBP1Q8TBC3 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHKBP1Q8TBC3 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHKBP1Q8TBC3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.96■□□□□ 0.47
SHKBP1Q8TBC3 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHKBP1Q8TBC3 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHKBP1Q8TBC3 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
SHKBP1Q8TBC3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.96■□□□□ 0.47
SHKBP1Q8TBC3 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.96■□□□□ 0.47
SHKBP1Q8TBC3 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHKBP1Q8TBC3 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.96■□□□□ 0.47
SHKBP1Q8TBC3 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHKBP1Q8TBC3 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.96■□□□□ 0.47
SHKBP1Q8TBC3 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.96■□□□□ 0.47
SHKBP1Q8TBC3 ACTL9-202ENST00000612068 1252 ntBASIC17.96■□□□□ 0.47
SHKBP1Q8TBC3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SHKBP1Q8TBC3 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHKBP1Q8TBC3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.96■□□□□ 0.47
SHKBP1Q8TBC3 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SHKBP1Q8TBC3 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHKBP1Q8TBC3 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SHKBP1Q8TBC3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHKBP1Q8TBC3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
SHKBP1Q8TBC3 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHKBP1Q8TBC3 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHKBP1Q8TBC3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.96■□□□□ 0.47
SHKBP1Q8TBC3 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHKBP1Q8TBC3 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.96■□□□□ 0.46
SHKBP1Q8TBC3 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SHKBP1Q8TBC3 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.95■□□□□ 0.46
SHKBP1Q8TBC3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SHKBP1Q8TBC3 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SHKBP1Q8TBC3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHKBP1Q8TBC3 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHKBP1Q8TBC3 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHKBP1Q8TBC3 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.95■□□□□ 0.46
SHKBP1Q8TBC3 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.95■□□□□ 0.46
SHKBP1Q8TBC3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SHKBP1Q8TBC3 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.95■□□□□ 0.46
SHKBP1Q8TBC3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHKBP1Q8TBC3 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHKBP1Q8TBC3 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHKBP1Q8TBC3 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHKBP1Q8TBC3 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.95■□□□□ 0.46
SHKBP1Q8TBC3 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
SHKBP1Q8TBC3 SLC25A6P2-201ENST00000497974 877 ntBASIC17.95■□□□□ 0.46
SHKBP1Q8TBC3 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.95■□□□□ 0.46
SHKBP1Q8TBC3 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHKBP1Q8TBC3 AC027612.4-201ENST00000605371 583 ntBASIC17.95■□□□□ 0.46
SHKBP1Q8TBC3 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.95■□□□□ 0.46
SHKBP1Q8TBC3 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.95■□□□□ 0.46
SHKBP1Q8TBC3 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.95■□□□□ 0.46
SHKBP1Q8TBC3 LINC01451-201ENST00000623792 534 ntBASIC17.95■□□□□ 0.46
SHKBP1Q8TBC3 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.95■□□□□ 0.46
SHKBP1Q8TBC3 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.95■□□□□ 0.46
SHKBP1Q8TBC3 AC092902.6-201ENST00000641783 218 ntBASIC17.95■□□□□ 0.46
SHKBP1Q8TBC3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHKBP1Q8TBC3 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.95■□□□□ 0.46
SHKBP1Q8TBC3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHKBP1Q8TBC3 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHKBP1Q8TBC3 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHKBP1Q8TBC3 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHKBP1Q8TBC3 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SHKBP1Q8TBC3 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.95■□□□□ 0.46
SHKBP1Q8TBC3 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
SHKBP1Q8TBC3 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHKBP1Q8TBC3 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHKBP1Q8TBC3 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SHKBP1Q8TBC3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SHKBP1Q8TBC3 AC022211.2-201ENST00000585075 2527 ntBASIC17.94■□□□□ 0.46
SHKBP1Q8TBC3 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.94■□□□□ 0.46
SHKBP1Q8TBC3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHKBP1Q8TBC3 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.94■□□□□ 0.46
SHKBP1Q8TBC3 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms