Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 MFSD11-216ENST00000590393 1141 ntBASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 SEMA6A-202ENST00000343348 6878 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 AC026748.1-201ENST00000624349 3251 ntBASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 GPR37L1-201ENST00000367282 6588 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 KLB-201ENST00000257408 6082 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 PTCH1-207ENST00000429896 6563 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 AC073869.1-201ENST00000415574 2762 ntBASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 AC018553.1-201ENST00000616682 1458 ntBASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 AL592490.1-201ENST00000409186 6347 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 SPTB-203ENST00000389721 6705 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 PTMA-205ENST00000410064 814 ntTSL 2 BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 CASP6-205ENST00000505486 538 ntTSL 4 BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 AC023632.3-201ENST00000521633 145 ntBASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 CCDC144A-204ENST00000360524 5830 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 PRKAB2-201ENST00000254101 5417 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 SIGLEC1-201ENST00000344754 6720 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
SPTSSBQ8NFR3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC9.4□□□□□ -0.91
SPTSSBQ8NFR3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
SPTSSBQ8NFR3 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
SPTSSBQ8NFR3 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
SPTSSBQ8NFR3 CACNA1C-205ENST00000399591 6535 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
SPTSSBQ8NFR3 CACNA1C-206ENST00000399595 6535 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
SPTSSBQ8NFR3 CACNA1C-207ENST00000399597 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
SPTSSBQ8NFR3 CACNA1C-208ENST00000399601 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
SPTSSBQ8NFR3 CACNA1C-217ENST00000399641 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
SPTSSBQ8NFR3 CACNA1C-218ENST00000399644 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
SPTSSBQ8NFR3 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
SPTSSBQ8NFR3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
SPTSSBQ8NFR3 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC9.4□□□□□ -0.91
SPTSSBQ8NFR3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.91
SPTSSBQ8NFR3 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.91
SPTSSBQ8NFR3 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.91
SPTSSBQ8NFR3 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SPTSSBQ8NFR3 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms