Protein–RNA interactions for Protein: Q8NEG5

ZSWIM2, E3 ubiquitin-protein ligase ZSWIM2, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM2Q8NEG5 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZSWIM2Q8NEG5 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZSWIM2Q8NEG5 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
ZSWIM2Q8NEG5 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ZSWIM2Q8NEG5 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZSWIM2Q8NEG5 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZSWIM2Q8NEG5 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZSWIM2Q8NEG5 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZSWIM2Q8NEG5 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.62■□□□□ 0.57
ZSWIM2Q8NEG5 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.62■□□□□ 0.57
ZSWIM2Q8NEG5 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZSWIM2Q8NEG5 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZSWIM2Q8NEG5 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZSWIM2Q8NEG5 RNF216P1-203ENST00000404404 2427 ntBASIC18.61■□□□□ 0.57
ZSWIM2Q8NEG5 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.61■□□□□ 0.57
ZSWIM2Q8NEG5 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZSWIM2Q8NEG5 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZSWIM2Q8NEG5 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ZSWIM2Q8NEG5 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZSWIM2Q8NEG5 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZSWIM2Q8NEG5 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.61■□□□□ 0.57
ZSWIM2Q8NEG5 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.61■□□□□ 0.57
ZSWIM2Q8NEG5 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ZSWIM2Q8NEG5 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZSWIM2Q8NEG5 AC104109.2-201ENST00000602919 1418 ntBASIC18.61■□□□□ 0.57
ZSWIM2Q8NEG5 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.61■□□□□ 0.57
ZSWIM2Q8NEG5 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZSWIM2Q8NEG5 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZSWIM2Q8NEG5 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZSWIM2Q8NEG5 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.61■□□□□ 0.57
ZSWIM2Q8NEG5 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.61■□□□□ 0.57
ZSWIM2Q8NEG5 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.61■□□□□ 0.57
ZSWIM2Q8NEG5 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZSWIM2Q8NEG5 AC034105.1-201ENST00000563488 319 ntBASIC18.61■□□□□ 0.57
ZSWIM2Q8NEG5 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.61■□□□□ 0.57
ZSWIM2Q8NEG5 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
ZSWIM2Q8NEG5 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.61■□□□□ 0.57
ZSWIM2Q8NEG5 BX640515.1-201ENST00000617215 977 ntBASIC18.61■□□□□ 0.57
ZSWIM2Q8NEG5 AC005593.1-201ENST00000624894 515 ntBASIC18.61■□□□□ 0.57
ZSWIM2Q8NEG5 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZSWIM2Q8NEG5 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ZSWIM2Q8NEG5 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.61■□□□□ 0.57
ZSWIM2Q8NEG5 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZSWIM2Q8NEG5 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZSWIM2Q8NEG5 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ZSWIM2Q8NEG5 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.61■□□□□ 0.57
ZSWIM2Q8NEG5 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZSWIM2Q8NEG5 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ZSWIM2Q8NEG5 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZSWIM2Q8NEG5 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZSWIM2Q8NEG5 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZSWIM2Q8NEG5 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.6■□□□□ 0.57
ZSWIM2Q8NEG5 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.6■□□□□ 0.57
ZSWIM2Q8NEG5 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZSWIM2Q8NEG5 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.6■□□□□ 0.57
ZSWIM2Q8NEG5 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ZSWIM2Q8NEG5 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZSWIM2Q8NEG5 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.6■□□□□ 0.57
ZSWIM2Q8NEG5 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZSWIM2Q8NEG5 AC002310.6-201ENST00000624451 1377 ntBASIC18.6■□□□□ 0.57
ZSWIM2Q8NEG5 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.6■□□□□ 0.57
ZSWIM2Q8NEG5 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZSWIM2Q8NEG5 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZSWIM2Q8NEG5 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZSWIM2Q8NEG5 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZSWIM2Q8NEG5 AC087163.2-201ENST00000457299 853 ntBASIC18.6■□□□□ 0.57
ZSWIM2Q8NEG5 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZSWIM2Q8NEG5 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZSWIM2Q8NEG5 AC093909.1-201ENST00000504731 1122 ntBASIC18.6■□□□□ 0.57
ZSWIM2Q8NEG5 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
ZSWIM2Q8NEG5 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.6■□□□□ 0.57
ZSWIM2Q8NEG5 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
ZSWIM2Q8NEG5 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZSWIM2Q8NEG5 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZSWIM2Q8NEG5 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZSWIM2Q8NEG5 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZSWIM2Q8NEG5 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ZSWIM2Q8NEG5 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.6■□□□□ 0.57
ZSWIM2Q8NEG5 PCDHB17P-201ENST00000539533 2393 ntBASIC18.6■□□□□ 0.57
ZSWIM2Q8NEG5 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.6■□□□□ 0.57
ZSWIM2Q8NEG5 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZSWIM2Q8NEG5 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZSWIM2Q8NEG5 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZSWIM2Q8NEG5 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZSWIM2Q8NEG5 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.59■□□□□ 0.57
ZSWIM2Q8NEG5 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.59■□□□□ 0.57
ZSWIM2Q8NEG5 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZSWIM2Q8NEG5 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.59■□□□□ 0.57
ZSWIM2Q8NEG5 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZSWIM2Q8NEG5 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZSWIM2Q8NEG5 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
ZSWIM2Q8NEG5 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.59■□□□□ 0.57
ZSWIM2Q8NEG5 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.59■□□□□ 0.57
ZSWIM2Q8NEG5 AC108751.1-201ENST00000490852 363 ntBASIC18.59■□□□□ 0.57
ZSWIM2Q8NEG5 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.59■□□□□ 0.57
ZSWIM2Q8NEG5 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
ZSWIM2Q8NEG5 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.59■□□□□ 0.57
ZSWIM2Q8NEG5 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ZSWIM2Q8NEG5 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.59■□□□□ 0.57
ZSWIM2Q8NEG5 AF228730.7-201ENST00000641842 219 ntBASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms