Protein–RNA interactions for Protein: Q86UN2

RTN4RL1, Reticulon-4 receptor-like 1, humanhuman

Predicted RBP Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4RL1Q86UN2 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTN4RL1Q86UN2 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTN4RL1Q86UN2 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RTN4RL1Q86UN2 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTN4RL1Q86UN2 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.25■□□□□ 0.51
RTN4RL1Q86UN2 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RTN4RL1Q86UN2 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.25■□□□□ 0.51
RTN4RL1Q86UN2 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
RTN4RL1Q86UN2 AC116353.5-201ENST00000638148 1699 ntBASIC18.25■□□□□ 0.51
RTN4RL1Q86UN2 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.25■□□□□ 0.51
RTN4RL1Q86UN2 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTN4RL1Q86UN2 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RTN4RL1Q86UN2 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTN4RL1Q86UN2 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.25■□□□□ 0.51
RTN4RL1Q86UN2 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTN4RL1Q86UN2 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
RTN4RL1Q86UN2 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RTN4RL1Q86UN2 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RTN4RL1Q86UN2 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTN4RL1Q86UN2 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTN4RL1Q86UN2 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTN4RL1Q86UN2 SPDYE7P-202ENST00000420373 878 ntBASIC18.25■□□□□ 0.51
RTN4RL1Q86UN2 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.25■□□□□ 0.51
RTN4RL1Q86UN2 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.25■□□□□ 0.51
RTN4RL1Q86UN2 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RTN4RL1Q86UN2 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.25■□□□□ 0.51
RTN4RL1Q86UN2 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.25■□□□□ 0.51
RTN4RL1Q86UN2 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
RTN4RL1Q86UN2 MIR4492-201ENST00000581627 80 ntBASIC18.25■□□□□ 0.51
RTN4RL1Q86UN2 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.25■□□□□ 0.51
RTN4RL1Q86UN2 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RTN4RL1Q86UN2 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.25■□□□□ 0.51
RTN4RL1Q86UN2 AC239800.4-201ENST00000603712 296 ntBASIC18.25■□□□□ 0.51
RTN4RL1Q86UN2 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTN4RL1Q86UN2 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
RTN4RL1Q86UN2 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.25■□□□□ 0.51
RTN4RL1Q86UN2 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
RTN4RL1Q86UN2 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTN4RL1Q86UN2 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTN4RL1Q86UN2 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.25■□□□□ 0.51
RTN4RL1Q86UN2 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
RTN4RL1Q86UN2 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTN4RL1Q86UN2 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.25■□□□□ 0.51
RTN4RL1Q86UN2 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.24■□□□□ 0.51
RTN4RL1Q86UN2 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTN4RL1Q86UN2 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
RTN4RL1Q86UN2 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RTN4RL1Q86UN2 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.24■□□□□ 0.51
RTN4RL1Q86UN2 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.24■□□□□ 0.51
RTN4RL1Q86UN2 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.24■□□□□ 0.51
RTN4RL1Q86UN2 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTN4RL1Q86UN2 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
RTN4RL1Q86UN2 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTN4RL1Q86UN2 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RTN4RL1Q86UN2 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
RTN4RL1Q86UN2 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTN4RL1Q86UN2 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.24■□□□□ 0.51
RTN4RL1Q86UN2 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.24■□□□□ 0.51
RTN4RL1Q86UN2 AC015922.1-201ENST00000421102 1152 ntBASIC18.24■□□□□ 0.51
RTN4RL1Q86UN2 AC092580.3-201ENST00000430932 139 ntBASIC18.24■□□□□ 0.51
RTN4RL1Q86UN2 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.24■□□□□ 0.51
RTN4RL1Q86UN2 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTN4RL1Q86UN2 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.24■□□□□ 0.51
RTN4RL1Q86UN2 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.24■□□□□ 0.51
RTN4RL1Q86UN2 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.24■□□□□ 0.51
RTN4RL1Q86UN2 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTN4RL1Q86UN2 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.24■□□□□ 0.51
RTN4RL1Q86UN2 LINC00896-202ENST00000609602 2128 ntBASIC18.24■□□□□ 0.51
RTN4RL1Q86UN2 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.24■□□□□ 0.51
RTN4RL1Q86UN2 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTN4RL1Q86UN2 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTN4RL1Q86UN2 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.24■□□□□ 0.51
RTN4RL1Q86UN2 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RTN4RL1Q86UN2 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.24■□□□□ 0.51
RTN4RL1Q86UN2 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTN4RL1Q86UN2 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
RTN4RL1Q86UN2 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RTN4RL1Q86UN2 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.24■□□□□ 0.51
RTN4RL1Q86UN2 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTN4RL1Q86UN2 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.24■□□□□ 0.51
RTN4RL1Q86UN2 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTN4RL1Q86UN2 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.24■□□□□ 0.51
RTN4RL1Q86UN2 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTN4RL1Q86UN2 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RTN4RL1Q86UN2 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RTN4RL1Q86UN2 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.23■□□□□ 0.51
RTN4RL1Q86UN2 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.23■□□□□ 0.51
RTN4RL1Q86UN2 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.23■□□□□ 0.51
RTN4RL1Q86UN2 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RTN4RL1Q86UN2 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.23■□□□□ 0.51
RTN4RL1Q86UN2 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
RTN4RL1Q86UN2 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTN4RL1Q86UN2 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTN4RL1Q86UN2 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.23■□□□□ 0.51
RTN4RL1Q86UN2 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTN4RL1Q86UN2 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTN4RL1Q86UN2 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTN4RL1Q86UN2 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTN4RL1Q86UN2 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RTN4RL1Q86UN2 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms