Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAI1Q7Z5J4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
RAI1Q7Z5J4 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAI1Q7Z5J4 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAI1Q7Z5J4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC14.51□□□□□ -0.09
RAI1Q7Z5J4 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAI1Q7Z5J4 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAI1Q7Z5J4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
RAI1Q7Z5J4 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.51□□□□□ -0.09
RAI1Q7Z5J4 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.51□□□□□ -0.09
RAI1Q7Z5J4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
RAI1Q7Z5J4 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.51□□□□□ -0.09
RAI1Q7Z5J4 AC069262.1-201ENST00000539058 672 ntBASIC14.51□□□□□ -0.09
RAI1Q7Z5J4 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RAI1Q7Z5J4 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAI1Q7Z5J4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.5□□□□□ -0.09
RAI1Q7Z5J4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAI1Q7Z5J4 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAI1Q7Z5J4 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.5□□□□□ -0.09
RAI1Q7Z5J4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RAI1Q7Z5J4 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAI1Q7Z5J4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAI1Q7Z5J4 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAI1Q7Z5J4 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.5□□□□□ -0.09
RAI1Q7Z5J4 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
RAI1Q7Z5J4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
RAI1Q7Z5J4 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAI1Q7Z5J4 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAI1Q7Z5J4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAI1Q7Z5J4 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAI1Q7Z5J4 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAI1Q7Z5J4 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAI1Q7Z5J4 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAI1Q7Z5J4 RN7SL589P-201ENST00000481268 310 ntBASIC14.5□□□□□ -0.09
RAI1Q7Z5J4 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.5□□□□□ -0.09
RAI1Q7Z5J4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.5□□□□□ -0.09
RAI1Q7Z5J4 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAI1Q7Z5J4 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.5□□□□□ -0.09
RAI1Q7Z5J4 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAI1Q7Z5J4 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAI1Q7Z5J4 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 AR-207ENST00000612010 3896 ntTSL 5 BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 AC138761.1-201ENST00000584393 385 ntBASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 AC026471.1-201ENST00000564629 3026 ntBASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 MIR661-201ENST00000384842 89 ntBASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 HMGA1P7-201ENST00000406908 502 ntBASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 AL592309.1-201ENST00000443127 649 ntBASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 AC079140.1-201ENST00000508039 487 ntBASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 AC025678.2-201ENST00000562061 970 ntBASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 MIR4515-201ENST00000584082 81 ntBASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
RAI1Q7Z5J4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
RAI1Q7Z5J4 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAI1Q7Z5J4 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
RAI1Q7Z5J4 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
RAI1Q7Z5J4 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAI1Q7Z5J4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms