Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CBWD3Q5JTY5 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CBWD3Q5JTY5 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.49■□□□□ 0.55
CBWD3Q5JTY5 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CBWD3Q5JTY5 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CBWD3Q5JTY5 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.49■□□□□ 0.55
CBWD3Q5JTY5 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CBWD3Q5JTY5 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
CBWD3Q5JTY5 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.49■□□□□ 0.55
CBWD3Q5JTY5 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CBWD3Q5JTY5 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CBWD3Q5JTY5 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CBWD3Q5JTY5 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CBWD3Q5JTY5 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CBWD3Q5JTY5 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CBWD3Q5JTY5 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.48■□□□□ 0.55
CBWD3Q5JTY5 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CBWD3Q5JTY5 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CBWD3Q5JTY5 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
CBWD3Q5JTY5 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
CBWD3Q5JTY5 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CBWD3Q5JTY5 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CBWD3Q5JTY5 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CBWD3Q5JTY5 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.48■□□□□ 0.55
CBWD3Q5JTY5 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CBWD3Q5JTY5 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CBWD3Q5JTY5 LAGE3P1-201ENST00000425356 484 ntBASIC18.48■□□□□ 0.55
CBWD3Q5JTY5 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CBWD3Q5JTY5 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.48■□□□□ 0.55
CBWD3Q5JTY5 AC018712.1-201ENST00000455767 687 ntBASIC18.48■□□□□ 0.55
CBWD3Q5JTY5 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CBWD3Q5JTY5 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.48■□□□□ 0.55
CBWD3Q5JTY5 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
CBWD3Q5JTY5 TERC-201ENST00000602385 541 ntBASIC18.48■□□□□ 0.55
CBWD3Q5JTY5 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.48■□□□□ 0.55
CBWD3Q5JTY5 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.48■□□□□ 0.55
CBWD3Q5JTY5 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CBWD3Q5JTY5 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CBWD3Q5JTY5 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.48■□□□□ 0.55
CBWD3Q5JTY5 AC092171.3-201ENST00000610122 2651 ntBASIC18.48■□□□□ 0.55
CBWD3Q5JTY5 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
CBWD3Q5JTY5 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CBWD3Q5JTY5 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CBWD3Q5JTY5 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
CBWD3Q5JTY5 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.48■□□□□ 0.55
CBWD3Q5JTY5 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CBWD3Q5JTY5 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CBWD3Q5JTY5 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CBWD3Q5JTY5 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CBWD3Q5JTY5 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.47■□□□□ 0.55
CBWD3Q5JTY5 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CBWD3Q5JTY5 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.47■□□□□ 0.55
CBWD3Q5JTY5 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CBWD3Q5JTY5 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.47■□□□□ 0.55
CBWD3Q5JTY5 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CBWD3Q5JTY5 PTCHD3P3-201ENST00000403073 906 ntBASIC18.47■□□□□ 0.55
CBWD3Q5JTY5 KRT18P27-201ENST00000427733 1299 ntBASIC18.47■□□□□ 0.55
CBWD3Q5JTY5 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.47■□□□□ 0.55
CBWD3Q5JTY5 FAM197Y8-203ENST00000450145 560 ntBASIC18.47■□□□□ 0.55
CBWD3Q5JTY5 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CBWD3Q5JTY5 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CBWD3Q5JTY5 KRT126P-201ENST00000549467 1181 ntBASIC18.47■□□□□ 0.55
CBWD3Q5JTY5 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.47■□□□□ 0.55
CBWD3Q5JTY5 AL031008.1-201ENST00000619963 541 ntBASIC18.47■□□□□ 0.55
CBWD3Q5JTY5 AC148477.8-201ENST00000624298 468 ntBASIC18.47■□□□□ 0.55
CBWD3Q5JTY5 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CBWD3Q5JTY5 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CBWD3Q5JTY5 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CBWD3Q5JTY5 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.47■□□□□ 0.55
CBWD3Q5JTY5 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CBWD3Q5JTY5 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CBWD3Q5JTY5 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.47■□□□□ 0.55
CBWD3Q5JTY5 AL645728.1-201ENST00000366221 2101 ntBASIC18.47■□□□□ 0.55
CBWD3Q5JTY5 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CBWD3Q5JTY5 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
CBWD3Q5JTY5 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.47■□□□□ 0.55
CBWD3Q5JTY5 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.47■□□□□ 0.55
CBWD3Q5JTY5 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CBWD3Q5JTY5 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CBWD3Q5JTY5 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CBWD3Q5JTY5 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CBWD3Q5JTY5 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.47■□□□□ 0.55
CBWD3Q5JTY5 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CBWD3Q5JTY5 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CBWD3Q5JTY5 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CBWD3Q5JTY5 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CBWD3Q5JTY5 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.46■□□□□ 0.55
CBWD3Q5JTY5 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CBWD3Q5JTY5 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.46■□□□□ 0.55
CBWD3Q5JTY5 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CBWD3Q5JTY5 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.46■□□□□ 0.55
CBWD3Q5JTY5 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CBWD3Q5JTY5 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CBWD3Q5JTY5 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CBWD3Q5JTY5 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.46■□□□□ 0.55
CBWD3Q5JTY5 PAWRP1-201ENST00000451083 565 ntBASIC18.46■□□□□ 0.55
CBWD3Q5JTY5 AC073648.2-201ENST00000510116 352 ntBASIC18.46■□□□□ 0.55
CBWD3Q5JTY5 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CBWD3Q5JTY5 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.46■□□□□ 0.55
CBWD3Q5JTY5 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms