Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.01■□□□□ 0.47
PTPN20Q4JDL3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
PTPN20Q4JDL3 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTPN20Q4JDL3 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTPN20Q4JDL3 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTPN20Q4JDL3 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTPN20Q4JDL3 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PTPN20Q4JDL3 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.01■□□□□ 0.47
PTPN20Q4JDL3 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.01■□□□□ 0.47
PTPN20Q4JDL3 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTPN20Q4JDL3 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.01■□□□□ 0.47
PTPN20Q4JDL3 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.01■□□□□ 0.47
PTPN20Q4JDL3 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.01■□□□□ 0.47
PTPN20Q4JDL3 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.01■□□□□ 0.47
PTPN20Q4JDL3 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.01■□□□□ 0.47
PTPN20Q4JDL3 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.01■□□□□ 0.47
PTPN20Q4JDL3 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.01■□□□□ 0.47
PTPN20Q4JDL3 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.01■□□□□ 0.47
PTPN20Q4JDL3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.01■□□□□ 0.47
PTPN20Q4JDL3 AL049840.3-201ENST00000602669 611 ntBASIC18.01■□□□□ 0.47
PTPN20Q4JDL3 MIR7706-201ENST00000613747 67 ntBASIC18.01■□□□□ 0.47
PTPN20Q4JDL3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.01■□□□□ 0.47
PTPN20Q4JDL3 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTPN20Q4JDL3 RNF216P1-203ENST00000404404 2427 ntBASIC18.01■□□□□ 0.47
PTPN20Q4JDL3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.01■□□□□ 0.47
PTPN20Q4JDL3 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PTPN20Q4JDL3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PTPN20Q4JDL3 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PTPN20Q4JDL3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
PTPN20Q4JDL3 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PTPN20Q4JDL3 PCDHB17P-201ENST00000539533 2393 ntBASIC18.01■□□□□ 0.47
PTPN20Q4JDL3 AP002414.3-201ENST00000589352 1468 ntBASIC18.01■□□□□ 0.47
PTPN20Q4JDL3 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.01■□□□□ 0.47
PTPN20Q4JDL3 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.01■□□□□ 0.47
PTPN20Q4JDL3 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18■□□□□ 0.47
PTPN20Q4JDL3 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18■□□□□ 0.47
PTPN20Q4JDL3 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18■□□□□ 0.47
PTPN20Q4JDL3 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PTPN20Q4JDL3 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18■□□□□ 0.47
PTPN20Q4JDL3 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTPN20Q4JDL3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PTPN20Q4JDL3 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTPN20Q4JDL3 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTPN20Q4JDL3 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18■□□□□ 0.47
PTPN20Q4JDL3 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PTPN20Q4JDL3 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18■□□□□ 0.47
PTPN20Q4JDL3 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
PTPN20Q4JDL3 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18■□□□□ 0.47
PTPN20Q4JDL3 AGGF1P2-201ENST00000426656 2106 ntBASIC18■□□□□ 0.47
PTPN20Q4JDL3 AC009078.2-202ENST00000463353 338 ntBASIC18■□□□□ 0.47
PTPN20Q4JDL3 RNA5SP419-201ENST00000515908 135 ntBASIC18■□□□□ 0.47
PTPN20Q4JDL3 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18■□□□□ 0.47
PTPN20Q4JDL3 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18■□□□□ 0.47
PTPN20Q4JDL3 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18■□□□□ 0.47
PTPN20Q4JDL3 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18■□□□□ 0.47
PTPN20Q4JDL3 AL121894.2-201ENST00000602977 491 ntBASIC18■□□□□ 0.47
PTPN20Q4JDL3 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
PTPN20Q4JDL3 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTPN20Q4JDL3 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18■□□□□ 0.47
PTPN20Q4JDL3 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
PTPN20Q4JDL3 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTPN20Q4JDL3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18■□□□□ 0.47
PTPN20Q4JDL3 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18■□□□□ 0.47
PTPN20Q4JDL3 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTPN20Q4JDL3 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
PTPN20Q4JDL3 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTPN20Q4JDL3 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18■□□□□ 0.47
PTPN20Q4JDL3 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTPN20Q4JDL3 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18■□□□□ 0.47
PTPN20Q4JDL3 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTPN20Q4JDL3 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18■□□□□ 0.47
PTPN20Q4JDL3 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PTPN20Q4JDL3 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PTPN20Q4JDL3 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN20Q4JDL3 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN20Q4JDL3 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN20Q4JDL3 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN20Q4JDL3 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
PTPN20Q4JDL3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN20Q4JDL3 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN20Q4JDL3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.99■□□□□ 0.47
PTPN20Q4JDL3 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.99■□□□□ 0.47
PTPN20Q4JDL3 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN20Q4JDL3 TPM4P1-201ENST00000436100 807 ntBASIC17.99■□□□□ 0.47
PTPN20Q4JDL3 RPS15P9-201ENST00000494093 319 ntBASIC17.99■□□□□ 0.47
PTPN20Q4JDL3 AC136632.2-201ENST00000512891 861 ntBASIC17.99■□□□□ 0.47
PTPN20Q4JDL3 SLC25A6P4-201ENST00000586535 553 ntBASIC17.99■□□□□ 0.47
PTPN20Q4JDL3 AL773604.1-201ENST00000617417 272 ntBASIC17.99■□□□□ 0.47
PTPN20Q4JDL3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN20Q4JDL3 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN20Q4JDL3 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN20Q4JDL3 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
PTPN20Q4JDL3 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN20Q4JDL3 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.99■□□□□ 0.47
PTPN20Q4JDL3 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN20Q4JDL3 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.99■□□□□ 0.47
PTPN20Q4JDL3 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
PTPN20Q4JDL3 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
PTPN20Q4JDL3 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PTPN20Q4JDL3 AC078925.2-201ENST00000624013 1973 ntBASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms