Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.67■□□□□ 0.1
LTBQ06643 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LTBQ06643 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LTBQ06643 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LTBQ06643 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LTBQ06643 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LTBQ06643 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.66■□□□□ 0.1
LTBQ06643 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
LTBQ06643 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.66■□□□□ 0.1
LTBQ06643 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LTBQ06643 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LTBQ06643 AL121761.2-201ENST00000598007 1648 ntBASIC15.66■□□□□ 0.1
LTBQ06643 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
LTBQ06643 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LTBQ06643 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.66■□□□□ 0.1
LTBQ06643 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.66■□□□□ 0.1
LTBQ06643 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.66■□□□□ 0.1
LTBQ06643 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
LTBQ06643 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LTBQ06643 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LTBQ06643 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.66■□□□□ 0.1
LTBQ06643 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.66■□□□□ 0.1
LTBQ06643 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
LTBQ06643 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
LTBQ06643 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
LTBQ06643 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.66■□□□□ 0.1
LTBQ06643 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LTBQ06643 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.66■□□□□ 0.1
LTBQ06643 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
LTBQ06643 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.66■□□□□ 0.1
LTBQ06643 MIR5100-201ENST00000579544 119 ntBASIC15.66■□□□□ 0.1
LTBQ06643 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.66■□□□□ 0.1
LTBQ06643 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LTBQ06643 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
LTBQ06643 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.66■□□□□ 0.1
LTBQ06643 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.66■□□□□ 0.1
LTBQ06643 AC114341.1-201ENST00000618070 349 ntBASIC15.66■□□□□ 0.1
LTBQ06643 AP000867.4-201ENST00000641616 219 ntBASIC15.66■□□□□ 0.1
LTBQ06643 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
LTBQ06643 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LTBQ06643 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LTBQ06643 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LTBQ06643 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LTBQ06643 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
LTBQ06643 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.66■□□□□ 0.1
LTBQ06643 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LTBQ06643 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LTBQ06643 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LTBQ06643 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LTBQ06643 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LTBQ06643 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LTBQ06643 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
LTBQ06643 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LTBQ06643 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LTBQ06643 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LTBQ06643 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.65■□□□□ 0.1
LTBQ06643 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LTBQ06643 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.65■□□□□ 0.1
LTBQ06643 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.65■□□□□ 0.1
LTBQ06643 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.65■□□□□ 0.1
LTBQ06643 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.65■□□□□ 0.1
LTBQ06643 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LTBQ06643 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LTBQ06643 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.65■□□□□ 0.1
LTBQ06643 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LTBQ06643 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LTBQ06643 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LTBQ06643 AC003669.1-201ENST00000334569 611 ntBASIC15.65■□□□□ 0.1
LTBQ06643 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.65■□□□□ 0.1
LTBQ06643 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LTBQ06643 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.65■□□□□ 0.1
LTBQ06643 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.65■□□□□ 0.1
LTBQ06643 AC064862.7-201ENST00000604520 867 ntBASIC15.65■□□□□ 0.1
LTBQ06643 AL139424.1-201ENST00000607572 797 ntBASIC15.65■□□□□ 0.1
LTBQ06643 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LTBQ06643 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.65■□□□□ 0.1
LTBQ06643 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
LTBQ06643 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.65■□□□□ 0.1
LTBQ06643 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LTBQ06643 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LTBQ06643 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LTBQ06643 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
LTBQ06643 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LTBQ06643 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LTBQ06643 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.65■□□□□ 0.1
LTBQ06643 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.65■□□□□ 0.1
LTBQ06643 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LTBQ06643 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
LTBQ06643 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.1
LTBQ06643 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
LTBQ06643 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LTBQ06643 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LTBQ06643 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LTBQ06643 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LTBQ06643 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.64■□□□□ 0.09
LTBQ06643 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.64■□□□□ 0.09
LTBQ06643 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LTBQ06643 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LTBQ06643 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LTBQ06643 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms