Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
SSBP1Q04837 AC010460.3-201ENST00000511359 1579 ntBASIC14.51□□□□□ -0.09
SSBP1Q04837 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP1Q04837 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SSBP1Q04837 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SSBP1Q04837 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP1Q04837 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP1Q04837 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SSBP1Q04837 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP1Q04837 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP1Q04837 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
SSBP1Q04837 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP1Q04837 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP1Q04837 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP1Q04837 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP1Q04837 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP1Q04837 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP1Q04837 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.51□□□□□ -0.09
SSBP1Q04837 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP1Q04837 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP1Q04837 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP1Q04837 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP1Q04837 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC14.51□□□□□ -0.09
SSBP1Q04837 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP1Q04837 UBE2SP1-201ENST00000450587 669 ntBASIC14.51□□□□□ -0.09
SSBP1Q04837 RBM17P1-201ENST00000453646 1190 ntBASIC14.51□□□□□ -0.09
SSBP1Q04837 ECEL1P2-202ENST00000465689 757 ntBASIC14.51□□□□□ -0.09
SSBP1Q04837 AC068472.1-201ENST00000474589 881 ntBASIC14.51□□□□□ -0.09
SSBP1Q04837 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC14.51□□□□□ -0.09
SSBP1Q04837 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC14.51□□□□□ -0.09
SSBP1Q04837 AC233702.5-201ENST00000584107 538 ntBASIC14.51□□□□□ -0.09
SSBP1Q04837 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC14.51□□□□□ -0.09
SSBP1Q04837 AL049637.2-201ENST00000641778 930 ntBASIC14.51□□□□□ -0.09
SSBP1Q04837 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP1Q04837 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP1Q04837 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP1Q04837 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP1Q04837 LINC00554-201ENST00000564841 3011 ntBASIC14.51□□□□□ -0.09
SSBP1Q04837 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SSBP1Q04837 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.51□□□□□ -0.09
SSBP1Q04837 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP1Q04837 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.51□□□□□ -0.09
SSBP1Q04837 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP1Q04837 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SSBP1Q04837 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SSBP1Q04837 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.51□□□□□ -0.09
SSBP1Q04837 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
SSBP1Q04837 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
SSBP1Q04837 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP1Q04837 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.5□□□□□ -0.09
SSBP1Q04837 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SSBP1Q04837 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
SSBP1Q04837 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP1Q04837 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP1Q04837 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP1Q04837 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
SSBP1Q04837 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
SSBP1Q04837 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.5□□□□□ -0.09
SSBP1Q04837 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
SSBP1Q04837 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP1Q04837 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.5□□□□□ -0.09
SSBP1Q04837 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP1Q04837 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP1Q04837 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SSBP1Q04837 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.5□□□□□ -0.09
SSBP1Q04837 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP1Q04837 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP1Q04837 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC14.5□□□□□ -0.09
SSBP1Q04837 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP1Q04837 EMC9-206ENST00000560403 872 ntTSL 2 BASIC14.5□□□□□ -0.09
SSBP1Q04837 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.5□□□□□ -0.09
SSBP1Q04837 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC14.5□□□□□ -0.09
SSBP1Q04837 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC14.5□□□□□ -0.09
SSBP1Q04837 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP1Q04837 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP1Q04837 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP1Q04837 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SSBP1Q04837 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP1Q04837 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP1Q04837 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP1Q04837 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
SSBP1Q04837 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP1Q04837 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.5□□□□□ -0.09
SSBP1Q04837 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP1Q04837 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP1Q04837 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP1Q04837 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP1Q04837 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC14.5□□□□□ -0.09
SSBP1Q04837 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP1Q04837 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.5□□□□□ -0.09
SSBP1Q04837 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP1Q04837 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSBP1Q04837 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.49□□□□□ -0.09
SSBP1Q04837 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
SSBP1Q04837 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSBP1Q04837 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
SSBP1Q04837 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSBP1Q04837 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SSBP1Q04837 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.49□□□□□ -0.09
SSBP1Q04837 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms